G156050


Basic Information

Item Value
gene id G156050
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 4188506 ~ 4188789 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211600
gactcttgaacacaactcaggaataaccctgcactttacttcaacatgtttacattgcagccgtcactttactgttaatctttttttaatatatatagttaatgtccataactgcattatttcgcacttgcactttttttatacatttctttgcttaagtaacttttaattttttttttttatgtctttgacaattagtttaatatttataaccttattgtatttttttgcactttttctatcttctatttggcattcttggcgaagagcaaagaaagaatttc

Function

NR:

description
uncharacterized protein LOC111575603 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211600 True 284 lncRNA 0.28 1 4188506 4188789

Neighbor

gene id symbol gene type direction distance location
LOC103036857 LOC108433503,LOC108264854 coding upstream 65026 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 189044 3977752 ~ 3999462 (+)
LOC103025504 LOC108425960,LOC108266765 coding upstream 289291 3858506 ~ 3899215 (+)
ndufa10 NA coding upstream 1224955 2942774 ~ 2963551 (+)
LOC103044837 NA coding upstream 1250436 2882827 ~ 2938070 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding downstream 107530 4296319 ~ 4510540 (+)
LOC103037478 LOC108434021 coding downstream 489414 4678203 ~ 4738405 (+)
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding downstream 727439 4916228 ~ 4920871 (+)
LOC103036856 LOC103036856 coding downstream 1332897 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 1347945 5536734 ~ 5597788 (+)
G156009 NA non-coding upstream 182514 3960894 ~ 4005992 (+)
G155985 NA non-coding upstream 281311 3906994 ~ 3907195 (+)
G155978 NA non-coding upstream 339634 3848455 ~ 3848872 (+)
G155976 NA non-coding upstream 340889 3846849 ~ 3847617 (+)
G155967 NA non-coding upstream 419179 3768573 ~ 3769327 (+)
G156060 NA non-coding downstream 56462 4245251 ~ 4245521 (+)
G156062 NA non-coding downstream 59033 4247822 ~ 4248039 (+)
G156066 NA non-coding downstream 80716 4269505 ~ 4269708 (+)
G156080 NA non-coding downstream 180941 4369730 ~ 4370105 (+)
G156096 NA non-coding downstream 295601 4484390 ~ 4484641 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 256343 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 574015 3611018 ~ 3614491 (+)
G155776 NA other upstream 1433394 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 2910244 1187146 ~ 1278262 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 386879 4575668 ~ 4637290 (+)
G156188 NA other downstream 968365 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 2904718 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 3183587 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 3411778 7600567 ~ 7606668 (+)

Expression


Co-expression Network