G156107


Basic Information

Item Value
gene id G156107
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 4550240 ~ 4550867 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU211658
ccttctggctctctgcctttagttaggctgttttattcagttctgccggagtcatttgccacactctgataatgttttatattctctgttttacataaatccagtcaaaactaattccatctctctgccttcctccgagttactgactgcccacctgtctgacccgataccgatgttggaccctcaggctctcatgtcctctgtctggccagactggaagtttctgaagtcagctcttctccatccaccaccacagatcagctgctcatcatccatcttactctataagccattagtggagctgctatacacctgaatatataaaacctatgtggatgtatgaaagactttttaaaattaatttaaaagccatttgaccagtggtaggatggtcccccctttaatgtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctccacgctcactgggggttctgtattatgtatattctatgtttaatgttttgcctgattctttgtcctgtaatcatgtttctgtaaagctgctttgtgccaacaccagttgtaaaaagcgctatacaaataaatttgatttgatttgatttgatttgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211658 True 628 lncRNA 0.42 1 4550240 4550867

Neighbor

gene id symbol gene type direction distance location
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 39700 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 426760 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 550778 3977752 ~ 3999462 (+)
LOC103025504 LOC108425960,LOC108266765 coding upstream 651025 3858506 ~ 3899215 (+)
ndufa10 NA coding upstream 1586689 2942774 ~ 2963551 (+)
LOC103037478 LOC108434021 coding downstream 127336 4678203 ~ 4738405 (+)
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding downstream 365361 4916228 ~ 4920871 (+)
LOC103036856 LOC103036856 coding downstream 970819 5521686 ~ 5524043 (+)
cdyl2 cdyl2 coding downstream 985867 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 1062094 5612961 ~ 5619291 (+)
G156095 NA non-coding upstream 36535 4512820 ~ 4513705 (+)
G156096 NA non-coding upstream 65599 4484390 ~ 4484641 (+)
G156080 NA non-coding upstream 180135 4369730 ~ 4370105 (+)
G156066 NA non-coding upstream 280532 4269505 ~ 4269708 (+)
G156062 NA non-coding upstream 302201 4247822 ~ 4248039 (+)
G156121 NA non-coding downstream 96761 4647628 ~ 4648023 (+)
G156151 NA non-coding downstream 317223 4868090 ~ 4868355 (+)
G156153 NA non-coding downstream 337729 4888596 ~ 4889001 (+)
G156157 NA non-coding downstream 402207 4953074 ~ 4953274 (+)
G156165 NA non-coding downstream 460959 5011826 ~ 5012075 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 618077 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 935749 3611018 ~ 3614491 (+)
G155776 NA other upstream 1795128 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 3271978 1187146 ~ 1278262 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 24801 4575668 ~ 4637290 (+)
G156188 NA other downstream 606287 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 2542640 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 2821509 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 3049700 7600567 ~ 7606668 (+)

Expression


Co-expression Network