G192009


Basic Information

Item Value
gene id G192009
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 22307607 ~ 22309156 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260528
aaaaacaaacagtgtAAGTGAaaaggtacagttaaaaaaaattacatcaatcaACACACTCACAacccaataaaagaaaaacagaaagagagtgagggagagagagagagaatcaagGCGAGGGAGTGAGAGCACCTCTGGGTGTCCTCTCCCCCATTTAGTGAAAGTAATTATACCTTTGTGCAAATTATACATAAATCATAACAGAAATTTATAAAAACTCCAGATTTGCTACAGTAAATCCATGATCACTACAAACCCCATGACTGGGGTCCTGACAGCGGTGTCTAACCAGTACCAGGATCATCTCCAACATAAGAATcaaaatttggtcaaatcaaaagaggtggtctctgTCCGAATCAGCTGAACCATGGTACGTTTTGTCTGCAATGCTTAAGTTAGTGTTCTTGAGATGCTTTGAACCTTCCGACCCATTAAAGCCAGTTGAGACAGTCTATCTTCAGcaattaaacaatagaaaaagaaaaagaagtggtgttgtgccaaaatctgactccccttGGCATGCAGACACGGCCTCCAGCACTAAGTGTACAAAAGATTACTCTGGTGATTCCATCTTAATCACCcaccatcactattgcactcttgtcttctgtctcacgtatgtctattTGTAACCTtgttgtacatatagtgtctcccattctttaatattatatatctattttctgtacttgctgtaatttttgggaaggagtgtgacgtaatttcaattctctgtatgtcgtgtacatatgcagtattgacaataaaactacttgacttgactgcatctgctgtaactgtagattaatccgtacttataaacaaaacaaaaggaacAAAATGAATCCTCATTCTGCTGTGTGACACACCTACACTCAAAGGGAGTCACATTCTGGCAGCAACCCAGAATTCAGCATaacacctggaaaggcaacTTTCCAAATTGATAACATTCTAAAATCAATCAGTGtaaagtatagagagactccgCACTCATAGATCATAGATGATAGATGATGTATTAAAGTTCATTAGTGTGCTCAGtcattaaactgcagtgtgaatccAAACCAGATAGGACCTTATGTACAGTATACAATCTATCAAACACATCAAGCTTCATCTGAACTTTAGTTCAAACATTTAGGTGGAAAAAAAGGTCTGTAAACACGTCTGGTCCTCATATGTCTCCGTGATCTTTTGAATGTTTTAAAGTCTCTGAGTCTAATGATGAAAGAGAATTAAATGAGAGTAGGAAAAGTTCTTCTGACTCGTATCTTGAGTTTTTCACCATGTAGAGCAGGAATGCGATGGCCTCTTCTGGTTTGCCTGTGATTTTACACCATGTGGAGAAAGCTATTTGGGGGAGGGGTTACTAGAACTTGGCCCAGATAGCTTATCATGTAGTGTCTCCCAAAAAAGCTCAGGGTCACTCCCCTACTCCTCCACAGCAGTAGTCAACAGAAAATCTCTCACCCTTCAGCGAGTCCTGCAACACCACAAAAACACCTCGACCGCTCAGAAGAACCAACAAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260528 True 1550 lncRNA 0.39 1 22307607 22309156

Neighbor

gene id symbol gene type direction distance location
eef1akmt3 NA coding downstream 4517 22297852 ~ 22303090 (-)
LOC111195450 NA coding downstream 14069 22286609 ~ 22293538 (-)
LOC103037062 LOC108424641,LOC106583265,LOC103359365,LOC100304514 coding downstream 22950 22259659 ~ 22284657 (-)
ctdsp2 ctdsp2,LOC106583267,LOC106565429 coding downstream 59990 22237447 ~ 22247617 (-)
avil avil coding downstream 78519 22207122 ~ 22229088 (-)
LOC103024753 LOC108424569 coding upstream 151302 22460458 ~ 22639548 (-)
LOC103040317 faim2 coding upstream 383920 22693076 ~ 22705489 (-)
LOC103040941 ndrg3,LOC108412994,LOC107655061,LOC107727846,LOC107749481,LOC107562126 coding upstream 430577 22739733 ~ 22782472 (-)
LOC103042162 LOC108412995 coding upstream 496425 22805581 ~ 22840324 (-)
LOC103025695 sulf2a,LOC108412941,LOC107655065,LOC107749484,LOC107685697,LOC107600506 coding upstream 540985 22850141 ~ 22925668 (-)
G192005 NA non-coding downstream 48811 22257915 ~ 22258796 (-)
G191898 NA non-coding downstream 305427 21999172 ~ 22002180 (-)
G191884 NA non-coding downstream 340895 21966509 ~ 21966712 (-)
G191880 NA non-coding downstream 349175 21957841 ~ 21958432 (-)
G191870 NA non-coding downstream 382759 21860126 ~ 21924848 (-)
G192012 NA non-coding upstream 33236 22342392 ~ 22342630 (-)
G192014 NA non-coding upstream 56852 22366008 ~ 22366333 (-)
G192120 NA non-coding upstream 98090 22407246 ~ 22441456 (-)
G192137 NA non-coding upstream 223298 22532454 ~ 22532716 (-)
G192138 NA non-coding upstream 300225 22609381 ~ 22653847 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 455965 21846969 ~ 21851642 (-)
elmo2 elmo2,LOC106583331 other downstream 762776 21510924 ~ 21544831 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other downstream 871154 21430016 ~ 21436453 (-)
brk1 brk1,BRK1,LOC106565571 other downstream 1204389 21099347 ~ 21103218 (-)
LOC103036492 card19,LOC108443695 other downstream 2779027 19511321 ~ 19528580 (-)
alas1 alas1,LOC106583798 other upstream 40191 22349347 ~ 22362458 (-)
amhr2 NA other upstream 400393 22709549 ~ 22722905 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other upstream 477007 22786163 ~ 22803642 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 745477 23054633 ~ 23058805 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 1730090 24039246 ~ 24105898 (-)

Expression


Co-expression Network