G193435 (qrich1,LOC107729405,LOC107558890)


Basic Information

Item Value
gene id G193435
gene name qrich1,LOC107729405,LOC107558890
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 28317344 ~ 28318704 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262496
AGAAAAActaacagagaaaataaaactgaattttgggggaaaaaaaaagaaaagaatataaataCACACCTTTCTGCCCAACATGATGGGAGCCTACACCCTTCAGGTAGCGGATGCTGGTGCTCTTGTCTTTCGGATTGGCTGGGTTCTTCTTTGTGTGTCTGAGCACTTTGGAGAAGGCCACTTTCATATGCTGCTCCACTGTGGTCAGGTGGAAGTACTTGGTGTTGAAGTACATTAATGTTGTAAGTAGAGTAGAAGGAGAATGTGCTCCCAGCTGTTTACATTCCCACAACATCTCCTCAGATACATGACTAGGAATAATATAACCAAGTGGGTGAATACTGGGCCTCCACTCCTCTAGTATTTTGTGTAAGCACTGGGAAAAGCGAGTGTAGTACAGATCTGAAAAAATGTCGTCCACTCTGTTGTTCTCAAACATGTATTTCTGTATGCATAAGAAGATATAATAAAGCGCGTCGGGTTCATACTGCTCGTCCTCTAAGCCACGGGCCTCCTGGGTCATCATGGCTAAAGCCACATTGAGTTCAGCTACTGAGCTGGAGATCAGATCCTCCCGGAAACGCAGCGGCTGGCGCC
>TU262497
CAACTTACCAAGTGGGTGAATACTGGGCCTCCACTCCTCTAGTATTTTGTGTAAGCACTGGGAAAAGCGAGTGTAGTACAGATCTGAAAAAATGTCGTCCACTCTGTTGTTCTCAAACATGTATTTCTGTATGCATAAGAAGATATAATAAAGCGCGTCGGGTTCATACTGCTCGTCCTCTAAGCCACGGGCCTCCTGGGTCATCATGGCTAAAGCCACATTGAGTTCAGCTACTGAGCTGGAGATCAGATCCTCCCGGAAACGCAGCGGCTGGCGCC

Function

symbol description
qrich1 Orthologous to human QRICH1 (glutamine rich 1).

NR:

description
PREDICTED: glutamine-rich protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262496 True 600 lncRNA 0.45 4 28317344 28318704
TU262497 False 278 lncRNA 0.49 2 28317344 28317721

Neighbor

gene id symbol gene type direction distance location
LOC111195424 NA coding downstream 9296 28302568 ~ 28308048 (-)
LOC111195423 NA coding downstream 16336 28296305 ~ 28301008 (-)
LOC103025279 tmcc1b,LOC108436190,LOC107746889,LOC107755185,LOC107696833,LOC107656050 coding downstream 22376 28269957 ~ 28294968 (-)
LOC103044024 LOC108436218 coding downstream 49404 28253784 ~ 28267940 (-)
LOC103026411 LOC107680412,LOC107751023,LOC107555990,LOC107714481,LOC107699319 coding downstream 92680 28217461 ~ 28224664 (-)
LOC103024327 NA coding upstream 4651 28323355 ~ 28329288 (-)
LOC103043100 ncoa3,LOC108436109,LOC108255004,LOC107717960 coding upstream 140376 28459080 ~ 28507556 (-)
LOC103046446 LOC108436063,LOC107728611,LOC107656039,LOC107600301 coding upstream 227875 28546579 ~ 28570942 (-)
LOC103042433 taf4,LOC108436032 coding upstream 833017 29151721 ~ 29173495 (-)
LOC103040895 LOC108436021 coding upstream 858642 29177346 ~ 29219008 (-)
G193426 NA non-coding downstream 72642 28243808 ~ 28244702 (-)
G193424 NA non-coding downstream 80875 28235165 ~ 28236469 (-)
G193411 NA non-coding downstream 151263 28165841 ~ 28166081 (-)
G193386 NA non-coding downstream 249663 28067474 ~ 28067681 (-)
G193370 NA non-coding downstream 581233 27735902 ~ 27736111 (-)
G193477 NA non-coding upstream 76993 28395697 ~ 28469608 (-)
G193540 NA non-coding upstream 276947 28595651 ~ 28596007 (-)
G193568 NA non-coding upstream 557213 28875917 ~ 28930921 (-)
G193637 NA non-coding upstream 857210 29175914 ~ 29176124 (-)
G193638 NA non-coding upstream 857751 29176455 ~ 29176865 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other downstream 104274 28194379 ~ 28213070 (-)
tmem167b tmem167b other downstream 301732 28010991 ~ 28015612 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other downstream 616013 27425042 ~ 27701331 (-)
LOC111195340 NA other downstream 925773 27390794 ~ 27391571 (-)
G193097 NA other downstream 1284255 27031663 ~ 27033089 (-)
LOC111195343 LOC108434908 other upstream 257403 28576107 ~ 28586222 (-)
G193541 NA other upstream 278851 28597555 ~ 28598638 (-)
G193737 NA other upstream 1847057 30165761 ~ 30180126 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other upstream 2491090 30809794 ~ 30830957 (-)
LOC103037496 mustn1,LOC103037496,LOC103359875,LOC107091502 other upstream 2851594 31170298 ~ 31194049 (-)

Expression


Co-expression Network