Gene
RNA
| Item | Value |
|---|---|
| gene id | G75442 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 10519203 ~ 10520123 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86055 | True | 798 | lncRNA | 0.37 | 2 | 10519203 | 10520123 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_10499885_10500843 | SDHAF4 | coding | upstream | 18144 | 10499215 ~ 10501778 (+) |
| CI01000012_10489814_10496226 | TLX1, TLX1.L | coding | upstream | 22619 | 10489727 ~ 10496584 (+) |
| CI01000012_10469322_10470665 | LBX1A, LBX1 | coding | upstream | 47830 | 10468583 ~ 10471373 (+) |
| CI01000012_10296725_10299883 | CYP17, CYP17A1 | coding | upstream | 217648 | 10296628 ~ 10301555 (+) |
| CI01000012_10260457_10272063 | NT5C2B, NT5C2, NT5C2A | coding | upstream | 246941 | 10259735 ~ 10272262 (+) |
| CI01000012_10572910_10604787 | NA | coding | downstream | 52707 | 10572830 ~ 10605280 (+) |
| CI01000012_10608607_10619833 | NA | coding | downstream | 88484 | 10608607 ~ 10620458 (+) |
| CI01000012_10661067_10678624 | OGFRL1 | coding | downstream | 140566 | 10660689 ~ 10679416 (+) |
| CI01000012_10714254_10788932 | NA | coding | downstream | 194131 | 10714254 ~ 10788932 (+) |
| CI01000012_10852509_10860759 | NA | coding | downstream | 329861 | 10849984 ~ 10860868 (+) |
| G75429 | NA | non-coding | upstream | 58816 | 10460088 ~ 10460387 (+) |
| G75356 | NA | non-coding | upstream | 198443 | 10320542 ~ 10320760 (+) |
| G75355 | NA | non-coding | upstream | 199918 | 10318993 ~ 10319285 (+) |
| G75349 | NA | non-coding | upstream | 225758 | 10293213 ~ 10293445 (+) |
| G75467 | NA | non-coding | downstream | 165894 | 10686017 ~ 10686254 (+) |
| G75468 | NA | non-coding | downstream | 166342 | 10686465 ~ 10686685 (+) |
| G75469 | NA | non-coding | downstream | 166564 | 10686687 ~ 10687042 (+) |
| G75470 | NA | non-coding | downstream | 167119 | 10687242 ~ 10687474 (+) |
| G75474 | NA | non-coding | downstream | 184028 | 10704151 ~ 10704372 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 294916 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 2151576 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 2711348 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 4594898 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 4702598 | 5813517 ~ 5816605 (+) |
| G75533 | NA | other | downstream | 624694 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 2110632 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 2225408 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 2495383 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 3131736 | 13651859 ~ 13652234 (+) |
