CI01000013_01054174_01110208 (FKBP16)


Basic Information

Item Value
gene id CI01000013_01054174_01110208
gene name FKBP16
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1054137 ~ 1110466 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_01054174_01110208.mRNA
AGGAAATGGACTGGCCACAGATGGGATTTATGTCATGCATTGACATATGAATTTCCCTGATAATTCTATTAGAGCCCATGTGGACGAGGCGCTTTAGAAAATACTACACGCCGTCACTAATGGATGCAGGTGCTCATCGGCTTGGCAGTTGAGCAGCAGCGACATCAATTTCTACAAACCTGGCGTGTGTTGTGCACTGGAAAGACGTTCAGCACTTTTAGGAAGAGATAAATGGTATCCTTAGCACCGTGTGGGGACATGGAACCAGAAGCCGGAGAACCAGAGGAGACAACATTGGAGTCTGAAATGTTTGTTAGGGAGAAAGAGGAGGTGAAGAGTGAAGAAGGTAACCAGCCCTGGCAGGTGCTCCAAGAACCAATCATGGAGCTGCAGAGAATGAATATTACAGGTAAGGAGGACGAGAAGAAATCAGTGGACAACAAAGAGGATGAAGAAGGAAGTGAGAAGAAAGACGAAATGGAGAATGAAGAGGCAGAAGAGATGAAGTGTGCTGAAAACTTGAGCAACATGTCCTCAGATGCTAATGCCTCCAGCAGCGACCCAACCAATGAGTCCATTCCCTCAAATACTCACATCAGCCCACCTGTGACCAATCAATCAGACCCAGAGGACAGCAGAAAACTGACAAAGACTCCCAGCTTTGGGAAAACAGTTCGGTTTAAGGAAATTGAAGCAGTGGAAGAAAGGGACAGCTCAGATGACACTCTTTTTCCAGACTTTGACAATGAAGAGTGGAGCAGCACCAGCTTTGAGGAGCTGTTTCTGGCAGACGACTGGAAGGATGTTACAGATGACCGCCTGGTAAGGAAGAAGGTGTTACAGGCCAGTCCCGAGAATGCCCTGACCCCGGCTTGGGGTCAAGAGGTCACACTGAAAATGCAGGGTGTGCTAGAGGATAGGACTGTGGTGGAGAAAGACTGCAAGCTGGTCTTCGTTATCGGAGAGGGAGATGTCAACCAGGCGCTGGAGGAGGGCACCATGTCAATGAAGCAAGGGGAGATTGCTTTACTGCTTGCAGATTCACAATACACCTATGGACTCCTGGGAAGCAGTGCAGACACAAGGGCTGAAGGGACATGCTCCTGTGTGATTCTCTCTCTTTGGCCCTGTTATGAGTGGCGTCCGCTGGGAGCTGGCAGTCGTGAGAGGCAGACTGATCCGCAGTTAATGGTTGTTTTGATGCTACTGATTAGAACTGTGAGCGGCAAACTTAAATTTAGCCCTGGCCCAAAGCGATCAGAGGAGGAAGAATGTGAGGGTCAAGCTAATAAGGCTGCTATAATTAGCCTCCCAGATGTGGAGAGTTCCTCCTTGACAACCCCTGACACATCCCCCTCATTAGCAGCAAAAGTGTGCAGATCTGGGCATGCAGACCACAGACGGACCGGGCCACATGGTATAGGCAGAAGCGAGTCATGCCACAGCAAGATTCGTGGTTACAGGGAGCCTGATATACCAGCCTGGGCACCTCTCCTGTATCAGCTGCAACTCCTACACTTCAGAGAAAAGCCAGACCCCCTTTCACTGCCCATCCCCGACCGGATCCGAATCGGCAACCAGAAACGTGAACGAGGCAACTTCTACTTCCAGAGGGAAGAATACAGCATGGCAGTACAGGCTTACTGCATGGCTTTAGATGTGCTTACGACACGCACACATGACGGTCAAAGCTGTGCGACAGAGGAGGAAGAAGAAGAGGTGAACGACTACCGGGTAAAATGTCTGAATAACCTGGCAGCAGCACAGCTGAAGCTTGGACAGTTCGATGAGGCGCTGCACACCAGTCAAGATGTGCTGTTTCTCGATCCCCAGAATGTCAAAGCGTTATTCAGAAAAGGAAAGCTTTTATCAGACAAGGGTGATTATGAGGAGGCCATGGAGACCCTGAAGAAGGCTTTGAAACTGGAGCCGTCCACTAAGGACAAAAAGCAAACATTTCCTCAGGAGGGAACTCATTGCAAAATTCAAATTAGGGTCATAGAGTCAGAGATGGCATGGGTTCAAAACATGGCTATTCATGCTGAACTGTCCAAACTGGTAAAAAGACAGGCGGGGGAAAATGAGACCCAGGATTGGCAAGCTAAACCAGCTCAAGTGTTTGGCGAAAACATAGCGCCCTTTCTGACACCCCCGCCCAAAAAGAAGCCGTTTGTAAGGAATTTCTTGGAAGTTTCTGCTTGGAGCTCTGGTGGTGGCCTTGGGCAGTTTAGTCACATCTGTGGTCCTGACCGCACGGAACTAGCTCCCTCGACCTACTTGCAAATTAACTACAAGTCTCACAAACAAACATTCCACAAAGCTGCCAAGGGACGGAGGAAAAATGCACTGAACTGTTTAAAGAGCAGCTGCATGGGCGGCTCTATCGGTGGAACACCGACTTATGCAGAGCAGAATATACGCACAGAATAAAGGGCAAGGCAAATGCATTTCAAATATTTGCAATAAA

Function

symbol description
fkbp16 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in epiphysis; retina; and telencephalon.

NR:

description
Si:ch211-13k12.1 protein, partial

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K09574 FKBP8; FK506-binding protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_01054174_01110208.mRNA True 2467 mRNA 0.49 12 1054137 1110466

Neighbor

gene id symbol gene type direction distance location
CI01000013_01029597_01029830 NA coding downstream 24307 1029539 ~ 1029830 (-)
CI01000013_00971329_00971942 NA coding downstream 81802 970513 ~ 972335 (-)
CI01000013_00873450_00880028 ZNF710A, ZNF710 coding downstream 174095 873228 ~ 880042 (-)
CI01000013_00857066_00859084 NA coding downstream 194933 856711 ~ 859204 (-)
CI01000013_00717175_00764059 RASGRF1 coding downstream 290078 717175 ~ 764059 (-)
CI01000013_01168439_01172788 PEX11A coding upstream 57268 1167734 ~ 1174268 (-)
CI01000013_01297354_01298578 NA coding upstream 186863 1297329 ~ 1298578 (-)
CI01000013_01474110_01481148 RGMA coding upstream 363324 1473790 ~ 1481692 (-)
CI01000013_01517589_01521988 NA coding upstream 407111 1517577 ~ 1523500 (-)
CI01000013_01542316_01542809 NA coding upstream 431659 1542125 ~ 1542911 (-)
G78593 NA non-coding downstream 2507 1049917 ~ 1051630 (-)
G78603 NA non-coding downstream 85844 968065 ~ 968293 (-)
G78602 NA non-coding downstream 86324 967604 ~ 967813 (-)
G78601 NA non-coding downstream 87800 966123 ~ 966337 (-)
G78588 NA non-coding downstream 111443 942459 ~ 942694 (-)
G78644 NA non-coding upstream 39481 1149947 ~ 1166176 (-)
G78694 NA non-coding upstream 75767 1186233 ~ 1186876 (-)
G78707 NA non-coding upstream 104835 1215301 ~ 1215615 (-)
G78719 NA non-coding upstream 154597 1265063 ~ 1265299 (-)
G78725 NA non-coding upstream 189228 1299694 ~ 1300048 (-)
G78296 NA other downstream 1027240 26528 ~ 26897 (-)
G79690 NA other upstream 1702781 2813247 ~ 2815392 (-)
G80262 NA other upstream 2454705 3565171 ~ 3567537 (-)
G80271 NA other upstream 2608967 3719433 ~ 3723607 (-)
G80399 NA other upstream 2793601 3904067 ~ 3906240 (-)
G80443 NA other upstream 2954476 4064942 ~ 4066017 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012819 fkbp16 coding NC_007129.7 CM002902.2 25653599 ~ 25745636 (+)