CI01000013_01168439_01172788 (PEX11A)


Basic Information

Item Value
gene id CI01000013_01168439_01172788
gene name PEX11A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1167734 ~ 1174268 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_01168439_01172788.mRNA
ATTCAAGTCACTCAGTTGGACTGTCAAGGCCCTGCTTTTACAATGTGTTTTATGTAAAGAATTTCCTATTGTATTTTATGACAACCATTTAATAAACAGTTGCTAAAAAGATTTTACAGTCCCGCCCTGTTGAGCACCTGATGATTTTGAATTTTATGCTTAAAACTTAAGGCCAATATCTATTACCACTATAAATCCAATCTGAATCCAATGTAAACACACTTTCAGAATTCAAACAACTCCTTTAAAATGCACACACAACTTGATTGATATGCCTGAGTCCTGCTCTGAAATTAATAAGAATTCAATTGACTTGCCTATAACAGCAACATCAATAAACATCATCATATGAAAATACAAATAGATCATATGCAAAATACATAAATTATTGTCGTATTATTATAAGACATATTTATAGGCCTATTATCACATCTTGCTAGTTTTTAAGCAACAAAATAATTACAAACACGTCAAGAAATACTGGATTTAAATGTAACATTAGCGTCATAAGGAACAGGTATTTCCGTCCTCCAATCCTGAGCCAGTCATTGGTCAGTTAAATCAGGAAGTACGCACTTGTCCTTCATCCAAAAACATCCGATTTAAAACTCGAGCTTTACAACAATTAACACATAAACACTTTCTAAAATGACAAAAAACAACATTGCATTAATGATGCAGTTACAATTATAACACAACCTCAAACAGTCATGTTAAAATGTAGCGTGTTAGCGAATATAGACTAAATACTACAGTGAACGTAAATGAATCGCTCTTTTGAGTCGGATCTTTAAATGAAACAGGTGAACTGGTTCGCAAAGGCAGTCTAAAAGATTCATTCACGACAGATTACGGAGGAAGAATTTACTTTCGGGTGTGAAAAGTAAGTTATTGACCGAATAGAAGAAATGTTACAAATAAAAAAGTAAATGTGTTTACGACTGAATCATAATTGCAACAAACAAAACTGTGATGCATTAAATTACAATAAATGCGCTTATTAATAACACACTGTCTAAATATGGCTTATTAGACCATTTTGATTCAAATCTGGGACGCCAGGGACCGTGCAATTACGTCATGACGTAAAACTGTAAAGGTTTCAAACGAATTGTTTGAAAGAACCGATTCCGGAAAGTGAATCAGACTTCCTATCGCTAAACAACAACTTTGTCCGTCATAAATTATACATTTTAAATCGCCTATAATTAGTTAGGCCAAAGCTTTATTAATTTTTACAAGCGCGACACAATAATTATTTACTAAATGGATTGAAGTTTGTTCTTTGGTTCCAGCGTGTGTTTTGTATGTTGCATGAACTTTCACCTCAGTTCCCATAGCCACGCAGGATCTTGTGGATTTGCCAGGACATACAGTGACTAAACTAACACGGATCTTTTAACTCTGAGTATGCACTGCTTTTCGACTTTTTAGTCTTTTATTCCTGAAAGAGTTTGGTTGCACACTAGCTGTTGCACACATGGAAACTTTCATTAGCTTCACTAACCAAAGTCAAGGAAGGGATCGCATATTCAGAGCAACCCAATATGCATGCGCTTTGGCGAAATATCTTCTGAGAAATGAAGCGAAGAGAAAAGAGCTGGTGAAAAAGCTGCATTTTCTGGAGTCTAATATGAGTTCGGGGCGGAAGCTATTCAGGCTTGGGAACACGGTGAACTCTGTCAGTGCAGCCAAGAGCACTCTTGATATTTCTGACCCCATGCTGCGCTTTTGCCTTACTTTTGCCAACTTCAGCCGTGCCTTGTACTTCATCTGTGACAACATACTCTGGGCCAGAAGTATCGGGCTAATACAAGATATCAACAAGGAGCGTTGGAGCTTAAACTCCACTCGCTTCTATTTCCTGTCATTGGTCATGAATCTAACCAGAGACGTCTATGCAATTGTCCAACTCATGGTGCAGAAGTCTCGGGACAGACACTACCAGCAAAAAGTCGACCAGCACCTTAATGAAAGCCCGGATGTGGCTTGTGTCATAGTGCCTCAGCTTGATGTGTTCCTCTTCCTTCTCCTCGAGAGCCTCAGAAGTCAGCCGTCTGTGGCTCTCGATACACTTAAAAATGTTTGCGATCTTTTCATTCCACTTGACAAATTGGGCATTTACCAGACAAATGCAGGGGTGGTGGGCTTCTGCGGGCTCGTTTCCTCTTTCTTAGGCATACTGTCAGTCTTGAGGCCCAACCTCAGAATCAAGCCATGATTTAGTGAATGAGGAAAATGCTTTAGAGTAACATCTTGAATTAGGATGCTTTCCTAACAAATGCTTTTAATGTGAAATTAGACTTCCATTAAGCTTACTTTTGTGAAGGGATCAACTTAATTGTTGTGTAAAAGAATAGAACATACCCCTAATGCAGCAGTGCACCTGCAAAAAATAATACTAAAAATTAGCATCATTTAGATGAGATTTCGCAGTGTGTGTTTGACCACATGCTGTGTACACTTTCATTAAATAGAGTGCCTTGCCATATCTGTTGTTGTATTACCATGGAAGCCCAAGTGAAATAATACACCTGTATAAGCACCGTTTAGTACTTTTAATAGAGATTATATCACTTTGGTACCGATATTGAGATGATGAGGGTACATTAACAAACTTGTGACATTTATTTTCCTGGCAAAAGATGCTCTTTATGGTGGCAGATGCACAGCTTTTTGAAATATGTGCTTGACATTTAGTCTCTTCTATGTGGAGAACCATTGTGAAATTAGATATATTCTACCTCATCCTGGCAGATCCTAGAGTTGTTTACAGATGTGTATTTTATTTTAGGTGTCAGACAGGGTTTTGTTGGTTGTTATTTTCAGTTTTGGTTTATCATGACAAGACAACTTTTATTACGTTCTGATTCTAGATAATTGGTTGTCAGCACAAACTGCTTTAAAAACTGTGAACTTTAATAAA

Function

symbol description
pex11a Predicted to be involved in peroxisome fission and regulation of peroxisome size. Predicted to be located in membrane and peroxisome. Predicted to be integral component of peroxisomal membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11A (peroxisomal biogenesis factor 11 alpha).

GO:

id name namespace
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13351 PEX11A; peroxin-11A

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_01168439_01172788.mRNA True 2926 mRNA 0.37 3 1167734 1174268

Neighbor

gene id symbol gene type direction distance location
CI01000013_01054174_01110208 FKBP16 coding downstream 57268 1054137 ~ 1110466 (-)
CI01000013_01029597_01029830 NA coding downstream 137904 1029539 ~ 1029830 (-)
CI01000013_00971329_00971942 NA coding downstream 195399 970513 ~ 972335 (-)
CI01000013_00873450_00880028 ZNF710A, ZNF710 coding downstream 287692 873228 ~ 880042 (-)
CI01000013_00857066_00859084 NA coding downstream 308530 856711 ~ 859204 (-)
CI01000013_01297354_01298578 NA coding upstream 123061 1297329 ~ 1298578 (-)
CI01000013_01474110_01481148 RGMA coding upstream 299522 1473790 ~ 1481692 (-)
CI01000013_01517589_01521988 NA coding upstream 343309 1517577 ~ 1523500 (-)
CI01000013_01542316_01542809 NA coding upstream 367857 1542125 ~ 1542911 (-)
CI01000013_01628415_01628978 NA coding upstream 453748 1628016 ~ 1629027 (-)
G78644 NA non-coding downstream 1558 1149947 ~ 1166176 (-)
G78593 NA non-coding downstream 116104 1049917 ~ 1051630 (-)
G78603 NA non-coding downstream 199441 968065 ~ 968293 (-)
G78602 NA non-coding downstream 199921 967604 ~ 967813 (-)
G78601 NA non-coding downstream 201397 966123 ~ 966337 (-)
G78694 NA non-coding upstream 11965 1186233 ~ 1186876 (-)
G78707 NA non-coding upstream 41033 1215301 ~ 1215615 (-)
G78719 NA non-coding upstream 90795 1265063 ~ 1265299 (-)
G78725 NA non-coding upstream 125426 1299694 ~ 1300048 (-)
G78728 NA non-coding upstream 129254 1303522 ~ 1303743 (-)
G78296 NA other downstream 1140837 26528 ~ 26897 (-)
G79690 NA other upstream 1638979 2813247 ~ 2815392 (-)
G80262 NA other upstream 2390903 3565171 ~ 3567537 (-)
G80271 NA other upstream 2545165 3719433 ~ 3723607 (-)
G80399 NA other upstream 2729799 3904067 ~ 3906240 (-)
G80443 NA other upstream 2890674 4064942 ~ 4066017 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012818 pex11a coding NC_007129.7 CM002902.2 25546227 ~ 25550960 (+)