G254902 (itpripl2)


Basic Information

Item Value
gene id G254902
gene name itpripl2
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171545.1
NCBI id APWO02001143.1
chromosome length 175720
location 68875 ~ 73637 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU348636
ACTTATTTTCAGGTTTATATACAATagttacaatatattttacaataaacatacatacttaaaaacaaaaaaaattaaaaatacattcattcattttcatgCCTCTAGAACTTCTATGGCTGTGACATCTGCCATCTGCATGTCATATTGCTTGTTCTAAGTGACACTTTTCTTACATGCTAACGCTTGTGCTATACTTGTTTCCCTATTTCAGCTGCTGTTCTGCTTTTAAGTACCAAAGCAGCTGAACCGAAACCACCCGCAGTTCCTCATGGAGCCGGTGGCACAAACAGAGCAACGTCTGAAGCAACACAAGCTCAAGTCTGTCTGAATCATCCTTTGCTAATGACCCAAACAGTCTTATAAATGCTGGGATTCCCAGAGCAAGTCTAGACCCATTTTTTAAGGATGAagtgcaaaaatgaaaaacatgtgaaagaaggtcaataacactttttttgcgCCTGCTGCCAGTAAGCACTTCCCACTGGTACATAATgaagtaaatatatttcatgCAAATAAcataggagaccacttaaaaaattatgagtttccttgattttaacAAACTGAAGATGgatgccatcaaaccaagctgaactggaagaatttttgcaccaggagtggaataaagttatccaaaagcagtctgtaagactggtggaggagagcatgcaagaagcataaaactgtgattaaaaaacatgattattccaccaaatattgattattctgaactcttaaatattttttaaaaactgcattatttgaggtctgaaagctctgcatctttttttttttgttatttcagccatttctcattttctgcaaataaatgctctaaatgacaatatttactcaaacatatacctataaatagcaaaatatgaTACTGATCATGAGATACTGATTcacaaactgaagtggtctcttaattcttttcagggctgtatatgtttatatttttcccTTTCAATTAACTTTTTGCAGTAACTAGGTCTTTCGCCAGTGCAGTGACAAACGATAAGCCAATTTAAGGACTCAAAATAAGCATAAACCATAACCAAGTTTAAACAACATATCAGTCTATTTATTCTTCAGTTCCTaaagcagattttttaaaacactatgGGAATTCTAGGTTTACATTTGTATTTAAGTAGTTTGGAGCCACGTTATGCaaaaaaaccatcagggttactgcattaaaaaactGAACATTAATATATTGgaagaatatatataatataatatattgggagaaatgtcaaaGGAAGATACACTTTACATAAAGTATGAAATCTgctgttgtatttgttttaaccTATGTATTTGAACCCaagagcccagacccatttcTTAAAATGTAGGTAAAATTTTAAAAGTGAATCAGACACATTCAGTAAGCAGctcattcttgttttttttttttatggtcatGTTTTCATGTGACAGCAATGATACGTTACAAAAACTCTGATTTTAGTCTTTTTGTACCATTTGCCACTGCAATGGAAAAATGACTCAACTGTGTCTACATTGAAATTGAGTATAGTAAGTTTATTGCattactctactctacttttTCAACCAAACCGGTTACCCGTGCTTAACATACTACATGGAAAAAGGCTGTTGTGATGTATTTCTGAGGGCTGTTCCAGTATAACGCCTGGCTGTAAACATACGATGATTCAGAGTGCTCCTGAGAGATAACACAATATTTGTGATGTTTCAATTCATacaacataatttttaaatccCTTTAGACATTTAGAACAGGACAGCTGTGTCCAGATGGGCCTGCTGAGACCTGCTTCTAGTGGGGAGTTTCATATCCTTTCTACAGGATATCAGTGGGCTCATGCTGGCCTTCTAAATGCTGTGGGATTGTGGAAAAATGAGCTCTCTTTGGCGCCTAACCTGTTCTGACTGTTCTCTACCCACAGACAACACTCCCCCAGGAGCTCTGACATCACAGGAACTCTGAGTCAACCCAGAAGTAACACTGCAGCCCTGCGAGGTGTACCGCTCCATGCTTTCATGAAAGTACAGTGGTATTATTAAACCTCTAGTACACACGTTTATATTTAAACCTTCTATTTAACTTTACATCTACAGCCAATGTGCAGAAGCCTGTTATGGCATGTGTGGGATTGAGTGCATTCAAAGCTTTCATAAGGCACAAGTACCAAAATTGCAAATGAGAATTGCATGGAAATTACAACCTACAACCTGAAAACAAAGCAGCAATATGGCTTCTAAAGTTTAAATAAACCCTTATTTTTTACCTCATATCAGCACCAAGTTACAGTACTTTAAGAATTacttctataaactacacataCAGTACTGCACAGTACTTCTGTTTTTATACATGACtctcaaaaacaaaacaactacAGCACTGTGAATAAGTTTTAGGCACCTCTGAAAAAGAGTTTTCCTAAGCAATACCAATACCActaatattgcaataaatacaaatgataAGCAAACAAAACCAGCAATTTTAGATCactgtgttccttaaaatatatcacaagCTCTCCTCTTGGAGTGATCTAGAGTTTTTACACTATAAACTATTCTATAAATCTTATTGCTgaaagaatatgttttaaatagtgtGCTTAGTTGCATAAAACCTCTGCACAGTGCTGTATGATCATTAAATACTTTCTTTGGTTTAATAATACGTATTGCATTAAGAACACTGTTCTCAAAAAGATGTCCCTTGcagttttttctatttctagTCTTCATATTCTCTTAAAAACACCAAGCAAACAGAGTCAAACTAAAGGCACGTGTTGACACAATTTCTTTACATATTATTTTGAACCAAACCTTAACGGATTCCTTAAGATGCCATTAGAGATCACATCAGAGTATGTTACACAAACGTTTACTCCAAAATAAGAGTGAAGGCAATCACTCAGCATCGATGTGCTTGCAATGGACCCCTCGTCCAAGGGTTGTCCTTTGAGGACGGCCAAGGCGTATGAGGCGATGGAGGTGAGCCCAGGAAAAGGCTAGACGTGCAGAGACCAGGTCCAGAGAACCAGCGCAGAATTCTGCCCACAAGTTGGACGGTACTGTCTCCTTTACGAGCTTTGGCAATGCAACAGATTCTGGCAGAAGCCCTGTGTCCCCCCCAAGCAGGAGATGACGAAGATTCCTGGCCTGCAGGCTGTCTCTTAAGCACCGTAGCAAGTCCTCCAGTCTGTCGACCAAGTGGCACTCTTCCCAGGCCTCAGGGGGTGTGCTGAGCAGCAGACGTATCCATGCGGTTTTCAGGGCATAGGACGAGAGCACCCCCCTCCATTCAGCTCCAGCTTGCTGGTCTAATGTCTGACCTCCTAGATCTCGTACCTCCTTGAGCAACTGAAGGCACTTCAGATGGCAGGAGTTGGCTGGAAGTTTGCTCTTCAGGAAGCCCAGCAATTTCTGCTCTTGCTTGGGGAAGTAGACTGTCCACAGGTTCTCCCCCTTTTGAGTTCCAGGAGCTGCAACCAGGAAGGCATTGTCGCCCAAAGGTAAGGCTGGGATTAACCGAACCCCCATGGAGATGTGGCAGCAGACATAGTCCGAGCGAGGGGTGAGGTGCAGCTGGACCCGCTGGCTCTCAACGAGGGACAAGCTGAGAGAGCATCTCTGCTCAAACGGAAAACGTACCATTGATAGGCAGTGCTGGGAAGTGGAATAGAACCAGCGCAAGACAGAATCCGGGCTTAACCTGTGGAATCCTGCAGAACCTTGCGAATGCAGGAAGGTGTCGGTGAATGCCTTGTGGCGCCGAATCCACTCTGACTTACGCGGGGTCTCCAGAGTCACCAGCGGTATCCCTCCTTTGGTGACGTTGTAGTTGCAAGGCTCCAACTTGAGTCCACGAGGTAAACGTAGAGGTACCAGAATGTCAAAGCAGTCCGGTGAACCCACCTTGTGCTCCTCATATGAGCTGCCAATTTGTACAAAGTCTCCCCGGAAGGCCAGGGAGGACTCAGGGGGTACATCAGTCCGGCCTACCTTGACCAGAACACTCACCAGCTTTGCCACATGAGCTTTGCTGTGGCCTAGAACGTGTGGAGAAAGTCGCACATGCTTCTCATAGTGATCCTCCAGAAGCTCTTTCTTAGGCACTGCTGGTTTGCAAGGAACTTCAGGGGCTCTGTGGAAGCCACGCTTGGTAGAGCCAGGTTGagtcgtacagtactttatgaaGAAGTAGCAGAGTGTAAAAGCCAGGACATACTTGAACAGAAGAATGGCTCCAGGCCCCTGATCTGAGCACCCGTCCCCTTGCTCTTCTGAGTCTCGAAGGATGAAGTGATGCAGCAGAAGCAAGGCACAAAGAATGCAAGTGACCAAAGGCCAGAAAACCCTGAGGTTTAGAGTGTACACACTCATCCTACTCCTCCAGCCCAGGCGTCTCAGCTTACACAGTGGTCCCGGGGTTTGCTAGCCCATGCTGGTCCAGCCTCCCAGCTGCTGAGGATCAGGGTAGAGCTGATGTTCCTCTAAGTTGTTGTAAGCgctgcttctgcttctgctgtatTTGAACCAACTCTTCAAACTTCTAAACACTTCCGTTGCTTCTCTGTCCTCTGCCTTGATGTTTACGTTCCAGATGTTCCTTCACGGGTTCCTCGTGTGACAAGAACAGCTGGCCTGATCCATTCACTCTGGCTGTTTGAAAATCCCCCCTCTTCTGTCTTGGAAGCGCTGtgtgaaagacagagagagagcaggcgCTGAGT

Function

symbol description
itpripl2 Predicted to be integral component of membrane.

NR:

description
PREDICTED: inositol 1,4,5-trisphosphate receptor-interacting protein-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU348636 True 4763 lncRNA 0.42 1 68875 73637

Neighbor

gene id symbol gene type direction distance location
clec19a clec19a,LOC107658453,LOC107583104 coding upstream 74127 147764 ~ 162283 (-)
G254898 hsd3b7,LOC106601563 other downstream 40688 26018 ~ 28187 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025449 NA non-coding NC_007114.7 CM002887.2 31231809 ~ 31239563 (+)