CI01000013_02009256_02029638


Basic Information

Item Value
gene id CI01000013_02009256_02029638
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2009251 ~ 2029797 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_02009256_02029638.mRNA
AATATTATTCTGCCCACAATGAAAGCAAGTCTTAGGGGTGGGTCGATAAAGGTTTGACAGCATTTTCCAATTCATTTTCCTCAGCTCTCGAAGCCAGGCTCAAATCTAATCATTGATCGCACTGTTAATCCATAACCAAGCTCAATCCATCCCCATGGAATGGATCATAAAATAAAACCGATAATAGGCAAAGGAACTCTTGACTTTCCAAATAACTGGGGAAGAGTTAAGCACAGAATAGGCTTTGGTTCATTTAATTTACACTTACGTACCTCACTAAAAGCACTCAGGATTGACACTGCCTTGATTTACCATGCTGCACTGTTGGGTAGAACACTGAGTGACCTCCTCTGTTGGTACAATCTAGATCTGACCCAAGACCATGAGAGTTCAGCTTTTGTCTACTGCCCAATGACCAGAAACAACCTTCCCGAACGCTGGAAATGTCAGACTATACAGGAAGCGCTTGTGCTTCTAGAGTATATGGGGCATAGCTACACTGGGACTTCCACAACAAATGCCCTGTCCCATGGCACTTCCTCCATTGTCAGCTGTCTTGAGTCGTCTCTGGGGCCTTGTTGGTTTGCAAAGGTCTTAGCAGGTAGATGTGGTGTTGCTTGTTTGCCTGTTGGAGAGACAAGTGTCAGAGAGAGGCTCATCATCTTCTTTTTCAACTGTGCCGGCCTCTTTTCTCTGGCGAGAGAATGGCCTGAAAGGGAAGGCTTGATGCCAGGTATTGGTGACACGGCAAGGGGAATTTGCTGCCTTTGCCACAAAAGATTTGGGGAGCCGCATTTGCATAAGATGAGTGAAGCTGTCAGACAAATAATACCAGCTTTCAGTCCTGCATTCTGCCACTTCTCCCCCATTTTTTGGCCAAGAGGTCACGGGCAAATTGAAAGTGGCAGCTCGGCCAGCATGTTTGACAGACTAATATTGTTAGAGTACCCTGTCATAGCCCTGATCAGAGCTGCACAACACATACTGTCTGCAAGGGGTCTCCGTGTTTTGGCTGATGGAACAACTCCAGGCAGTCCCAAGAAGAAGGCAGAGGAAAGACAGAGGCGTCTCATTCCATTTCAGGGAACAATAGTAATTCCCTAATTAAA
>TU90013
GCGCGCCTAATGTGCAGAACGCAAGTATTGTAAATTTCCCATGCACACCCTATTCCCACATTAAAACCAACAGCGAAATATCACAAAAGCATGTTTTCTTACTGTCTGTCAGAGAGGCTCATCATCTTCTTTTTCAACTGTGCCGGCCTCTTTTCTCTGGCGAGAGAATGGCCTGAAAGGGAAGGCTTGATGCCAGGTATTGGTGACACGGCAAGGGGAATTTGCTGCCTTTGCCACAAAAGATTTGGGGAGCCGCATTTGCATAAGGTCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_02009256_02029638.mRNA False 1109 mRNA 0.46 6 2009251 2029797
TU90013 True 274 lncRNA 0.47 1 2017353 2017626

Neighbor

gene id symbol gene type direction distance location
CI01000013_01789191_01802356 NA coding downstream 206493 1789173 ~ 1802758 (-)
CI01000013_01685711_01689064 NA coding downstream 319857 1685643 ~ 1689394 (-)
CI01000013_01639151_01640992 LYSMD4 coding downstream 368259 1638986 ~ 1640992 (-)
CI01000013_01628415_01628978 NA coding downstream 380224 1628016 ~ 1629027 (-)
CI01000013_01542316_01542809 NA coding downstream 466340 1542125 ~ 1542911 (-)
CI01000013_02144531_02157776 NA coding upstream 114187 2143984 ~ 2158007 (-)
CI01000013_02295361_02314298 MCTP2A coding upstream 264991 2294788 ~ 2314812 (-)
CI01000013_02321895_02371964 MEF2A, MEF2AA coding upstream 292098 2321895 ~ 2371964 (-)
CI01000013_02483356_02484395 NA coding upstream 452973 2482770 ~ 2484395 (-)
CI01000013_02484671_02489919 NA coding upstream 454874 2484671 ~ 2490260 (-)
G79002 NA non-coding downstream 2109 2006899 ~ 2007142 (-)
G79001 NA non-coding downstream 2535 2006394 ~ 2006716 (-)
G78999 NA non-coding downstream 5645 2003318 ~ 2003606 (-)
G78978 NA non-coding downstream 6473 2001530 ~ 2002778 (-)
G78974 NA non-coding downstream 22328 1980552 ~ 1986923 (-)
G79031 NA non-coding upstream 34185 2063982 ~ 2064197 (-)
G79725 NA non-coding upstream 413625 2443422 ~ 2443767 (-)
G79736 NA non-coding upstream 426552 2456349 ~ 2456662 (-)
G79740 NA non-coding upstream 432187 2461984 ~ 2462244 (-)
G78296 NA other downstream 1982354 26528 ~ 26897 (-)
G79690 NA other upstream 783450 2813247 ~ 2815392 (-)
G80262 NA other upstream 1535374 3565171 ~ 3567537 (-)
G80271 NA other upstream 1689636 3719433 ~ 3723607 (-)
G80399 NA other upstream 1874270 3904067 ~ 3906240 (-)
G80443 NA other upstream 2035145 4064942 ~ 4066017 (-)
G79009 NA non-coding downstream 4078 2013043 ~ 2013275 (-)
G79008 NA non-coding downstream 4507 2012608 ~ 2012846 (-)
G79006 NA non-coding downstream 7504 2009647 ~ 2009849 (-)
G79015 NA non-coding upstream 10320 2027946 ~ 2028154 (-)

Expression


Co-expression Network