CI01000013_02483356_02484395


Basic Information

Item Value
gene id CI01000013_02483356_02484395
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2482770 ~ 2484395 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_02483356_02484395.mRNA
ATGAAAACCAAATTGTGTTTTTTAGGACCCTGTGGCATCAAAAATCTGGGACTGATGGCCTTCAAGGACCAGGTGCAAAAAACACTCTATCGGCGTGAGAGACCCCCAGCTCGCTCTTCTCAGACCTCTGTAATGGAGACCAGACTTCCATCCCAAGATTCCTCGCTGCCCCGCCCACCCACTCCCCTGCTGCAAAGCCCTCTGGGAGCTCTCAGGCACAGCTTGGCAGCACATGACCAGAAAGATTCCCCTTATGAACCGCCGCCTTTATATTCCTCCCTCCTAATCTACACCCTCAGGCGTTCCTTTACACACTCTTCATCCTCTCTTCCAAAATCAATCACGCCAAGCAGTGTGGAGTCTGATCCTCGTTCGGAGCTTGTTTTTCGAGCTGCACGGTTCGGTCGGCTTTATTTTGGAAAGCGAATAACACTTGAGCGCGGCTCGAACCTCGAGCCTTCACGCTACACACAACGGTCGCATAGCTGTGGTCAAATCTTAAACTCCATCATCCGTAATTGGATAAAAACCAGCACAATAGCAGTCTGGATCTGTGAAAAAAGCCAGTGTTTTCTGGGAAAGTGGGCCAGGTTCGTTTTGAAAGGCGAACAATGCATTTAGAGACTTTAAAATCACTTACGACCTCACTGGGAAAGAGACAAAGGGGAACATTCGCTCTTATTTGTCCTCTATCAGTGCGTCTTAATGCGGTTTCGTCACTGTTTGTGTACGCAGGGAGTCCAAGGGGGCGAATCAAAGCTGAAAGATATCGAAGAGGGTAATGGCCTTCTGCGTGATAGATGGTAAAGAGATGGATGAAAAATAGATAGGCCATTTTTCATGAAACCCAGGCCTTTACTGCAGGTGGGATTAGAGGATGAGTGATGTTGGGCCAGTGAAAGTATTAATATATCATTAGTATTGATCTTTTTCATTAGCAGCGCTGTCTGGCCAGCAGAATCTAAGCACTATTGACTTGTGGTACAGGAGAGTGCTTCAGCTGGGCTCCGTATGATCGATGCTTCGTCCTCTCATCCACACAAACGTGCTTTTTCAAAGCTTAAATACTAAGGAGCAAACATAAAAATGCTTTTTGTGCTTTATAAAGCCCTAAAGATATATATGACATCTTCTGCAGTTTGATTTGTGCTCTTATTTTTGCCCAGCATTTTGCCCAATATTTATTGCCTTGCTGAAAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_02483356_02484395.mRNA True 1207 mRNA 0.45 3 2482770 2484395

Neighbor

gene id symbol gene type direction distance location
CI01000013_02321895_02371964 MEF2A, MEF2AA coding downstream 110806 2321895 ~ 2371964 (-)
CI01000013_02295361_02314298 MCTP2A coding downstream 167958 2294788 ~ 2314812 (-)
CI01000013_02144531_02157776 NA coding downstream 324763 2143984 ~ 2158007 (-)
CI01000013_02009256_02029638 NA coding downstream 452973 2009251 ~ 2029797 (-)
CI01000013_01789191_01802356 NA coding downstream 680012 1789173 ~ 1802758 (-)
CI01000013_02484671_02489919 NA coding upstream 276 2484671 ~ 2490260 (-)
CI01000013_02515682_02518699 CBFB coding upstream 31065 2515460 ~ 2519236 (-)
CI01000013_02529628_02531898 GNAO1, GNAO1A, GNAO1.L coding upstream 45162 2529557 ~ 2531898 (-)
CI01000013_02536846_02547039 GNAO1, GNAO1A coding upstream 52451 2536846 ~ 2547039 (-)
CI01000013_02606100_02629603 GNAO1, GNAO1A coding upstream 121705 2606100 ~ 2629603 (-)
G79744 NA non-coding downstream 16887 2465669 ~ 2465883 (-)
G79740 NA non-coding downstream 20526 2461984 ~ 2462244 (-)
G79736 NA non-coding downstream 26108 2456349 ~ 2456662 (-)
G79725 NA non-coding downstream 39003 2443422 ~ 2443767 (-)
G79672 NA non-coding upstream 102057 2586452 ~ 2602617 (-)
G79752 NA non-coding upstream 146655 2631050 ~ 2631306 (-)
G79755 NA non-coding upstream 148093 2632488 ~ 2632836 (-)
G79756 NA non-coding upstream 148762 2633157 ~ 2633376 (-)
G79757 NA non-coding upstream 149009 2633404 ~ 2633727 (-)
G78296 NA other downstream 2455873 26528 ~ 26897 (-)
G79690 NA other upstream 328852 2813247 ~ 2815392 (-)
G80262 NA other upstream 1080776 3565171 ~ 3567537 (-)
G80271 NA other upstream 1235038 3719433 ~ 3723607 (-)
G80399 NA other upstream 1419672 3904067 ~ 3906240 (-)
G80443 NA other upstream 1580547 4064942 ~ 4066017 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012802 cbfb coding NC_007129.7 CM002902.2 22994113 ~ 23072665 (+)