CI01000013_03885988_03895027 (KIAA1147)


Basic Information

Item Value
gene id CI01000013_03885988_03895027
gene name KIAA1147
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3885988 ~ 3895027 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03885988_03895027.mRNA
ATGGTTGAACAATCGGATCGCGCTCCGCTGCTGGACTGGGAGGAGGTTCCCCCGGCCGAACTTGCCCCATCGGTTCCATCACCGGAGACTGGGGATGCAATACAATCCGGTCTATCGAGTTACCCGGCCGAGGGCAGTGTAGGAGCAGATATCTCCTTAAACAGAAGCCCAGCGAGACCGAATAGTGTAACAGCTGTTCCAGGCGAAAGTGCACATTCTCCCTATAAGCAGTACAGCGGCCCGGGAGGAGATGCTTCTGCCACTGATGAGGAGGGAGACTGCGCCTTTCATGGACTGTCAGTCAGGGATCGGAGGATCACGGGGTCTGGATGGGAAGAAAAAGATCAGATTGTTGCTGTGTTCGTTGTGACTTTCGACACCAGATCGGGGAATATGATAGAATGGTGCCTACCTCAAGATGTGAATCTGGAGGGAGTAGAGTTCAAGTCAATGGCCAGCGGCTCTCATCGGATCTCAAGTGACTTCATATATTTCCGTAAAGGCTGTTATTTTGGACTAGCGTGCTTTGCAAACATGCCTGTGGAAAGTGAGCTGGAACGAGGAGCTCGGATGAAATCTGTAGGGATTTTGTCTCCTTCTTACACACTGCTATACCGTTACATGCACTTCCTGGAGAACCAAGTCCGGCACCAGTTGCAGTGTCCAGGCCAGTACTCTCCACTGGAAGCTTTCTACGAGGATAAAAAGGCAGTGTTGCCCCCAGGAGGGAACGGTTTGGTCACAGCCTGCCCGACCAGTGCTCTTGGACCCATAGTCAACCGCTGCATGCATCCAGAGATGAAGATTACACACCCGGCTGGCTGCATGTCCCAGTTCATCCGCTTCTTTGGAGAGCAGATCATGGTGCTGTGGAAGTTTGCTTTGCTCAGGAAACGCATCCTTATTTTCTCTCCTCCCCCTGTCGGTGTGGTCTGCTATCGAGTATACTGTTGCTGCTGCCTTGCTAATGTGTCCATTCCTGGGATGGGCATGTCTGTTCCGGAGTTCCGGCCCTTCTTTTACATCAATGTTGCTGACATCACTGCTCTTGAGGCTGAGCCGTCTTATGTGGCCTGTACAACAGAGAAGATCTTTGAGGAAAAGAAGGAGCTGTATGATGTCTACATTGACAATCAGAATGTAAAGACACACAGAGAGAGCCTCCAGCCTCTGCTCAGACTCAACAGTGCAGACAGAGAGAAGTATCGCAAGCTCTGTGAGCAGAGGCAGATGCTGCTGTACTCTCAGGAGGTGGATGGGGACTGCGCATCCAGTGAGGAAGACCTCTTCATTTTGTTCTTCATGGAACAGAACAACAGAATCTTCCAGACCCTATCTGAGTTGGCGGGGAGCGCCGATCCTACCCTGACTGCTGAGCACATGAGAGCCATGGGGCTGGATCCTCAGGGCGACCGCGGTTTTCTCGTCGACCTGCTGGAAATCTACGGCATCGACGTCATGCTGGTTATCGACAACCCCTGCTGCCCGGCTACAACACACTGCCTACTGATTACCTGCTTTCTTTTCTCTCTTTCTCTGGCTTGGCTATCTCAGGAGCCATTCCTGACACCTCTGGACCACACTGATACTGCCAACACCAACAAGCCAGTGCTGTCTGGGGGAACTGATGTGACGTCCCCAGTGGATATAAATCTGCTTCACTTGGACACCAGAGAATCGGAAAAGCAACTCTCACTCCCTGGATCCTCCTGTTTTTTGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03885988_03895027.mRNA True 1722 mRNA 0.52 11 3885988 3895027

Neighbor

gene id symbol gene type direction distance location
CI01000013_03856173_03872356 BCL2L13 coding upstream 13041 3856173 ~ 3872947 (+)
CI01000013_03843207_03852634 WNT2 coding upstream 31963 3843207 ~ 3854025 (+)
CI01000013_03823326_03839656 ASZ1 coding upstream 46078 3823326 ~ 3839910 (+)
CI01000013_03744519_03787129 CTTNBP2 coding upstream 97811 3744519 ~ 3788177 (+)
CI01000013_03715150_03721616 SYNM coding upstream 164257 3715150 ~ 3721731 (+)
CI01000013_03902606_03908849 IGHMBP2 coding downstream 7579 3902606 ~ 3909058 (+)
CI01000013_03937929_03938255 FAM180B coding downstream 42902 3937929 ~ 3938261 (+)
CI01000013_03949848_03950925 NA coding downstream 54821 3949848 ~ 3951293 (+)
CI01000013_03952621_03964132 KIF23 coding downstream 57594 3952621 ~ 3964234 (+)
CI01000013_04051081_04064651 NA coding downstream 155810 4050837 ~ 4065829 (+)
G80088 NA non-coding upstream 79273 3806054 ~ 3806715 (+)
G80087 NA non-coding upstream 80518 3805215 ~ 3805470 (+)
G80083 NA non-coding upstream 92588 3793004 ~ 3793400 (+)
G80081 NA non-coding upstream 93107 3792667 ~ 3792881 (+)
G80075 NA non-coding upstream 145429 3740276 ~ 3740559 (+)
G80143 NA non-coding downstream 32143 3927170 ~ 3927724 (+)
G80144 NA non-coding downstream 33295 3928322 ~ 3928550 (+)
G80105 NA non-coding downstream 51777 3946804 ~ 3948697 (+)
G80153 NA non-coding downstream 115288 4010315 ~ 4010552 (+)
G80062 NA other upstream 301204 3584008 ~ 3584784 (+)
G79309 NA other upstream 1418817 2466765 ~ 2467171 (+)
G77695 NA other upstream 2933019 946521 ~ 952969 (+)
G77533 NA other upstream 3176439 708833 ~ 709549 (+)
G80845 NA other downstream 940051 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2161271 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2183535 6075400 ~ 6081684 (+)
G81994 NA other downstream 3440918 7335945 ~ 7338239 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013392 dennd11 coding NC_007129.7 CM002902.2 20541316 ~ 20560059 (-)
eurasian perch (Perca fluviatilis) G228784 LOC103359233,LOC104943309,LOC100709697 unknown NC_053134.1 CM020931.1 19410490 ~ 19413704 (+)
bowfin (Amia calva) AMCG00006917 LOC107596953 coding CM030134.1 CM030134.1 25912355 ~ 25937570 (+)