G282507


Basic Information

Item Value
gene id G282507
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172511.1
NCBI id APWO02002109.1
chromosome length 285184
location 202690 ~ 207490 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU388048
CATCAGAGAGAGCAGCACACAGACAGGATTAGAAAACTGATGTCCTGCAAAAATCCCTGCAGCAACAATCACCCCAGACCCTCTGTGACCCACAGCCCACCTCACATACAGAGCCGTGGACCTGCTGGAGAACCACACACTGCAGCCAAatggagtggagagagagaagcagcagAATTGAGGGAGGAGAGAGGAACTGGAGATGCAGGAGAAAGACCAAAACCACCACCCAGGAGACGGCAGTGTGGAGTTAAATATCCAGCCTCCAGTACTGGTACAGTATTCAGTTTA

Function

GO:

id name namespace
GO:0009259 ribonucleotide metabolic process biological_process
GO:0009260 ribonucleotide biosynthetic process biological_process
GO:1901293 nucleoside phosphate biosynthetic process biological_process
GO:0009056 catabolic process biological_process
GO:1901575 organic substance catabolic process biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0046390 ribose phosphate biosynthetic process biological_process
GO:0055086 nucleobase-containing small molecule metabolic process biological_process
GO:0019637 organophosphate metabolic process biological_process
GO:0006753 nucleoside phosphate metabolic process biological_process
GO:0009141 nucleoside triphosphate metabolic process biological_process
GO:0009142 nucleoside triphosphate biosynthetic process biological_process
GO:0044283 small molecule biosynthetic process biological_process
GO:0090407 organophosphate biosynthetic process biological_process
GO:1901135 carbohydrate derivative metabolic process biological_process
GO:1901137 carbohydrate derivative biosynthetic process biological_process
GO:0009165 nucleotide biosynthetic process biological_process
GO:0019693 ribose phosphate metabolic process biological_process
GO:0009199 ribonucleoside triphosphate metabolic process biological_process
GO:0009201 ribonucleoside triphosphate biosynthetic process biological_process
GO:0034404 nucleobase-containing small molecule biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU388048 True 291 lncRNA 0.52 2 202690 207490

Neighbor

gene id symbol gene type direction distance location
LOC103035911 kcnj4 coding upstream 135618 63161 ~ 67072 (+)
G282461 polr2f non-coding upstream 21893 57160 ~ 180797 (+)
G282517 NA non-coding downstream 45766 253256 ~ 253622 (+)
LOC103036536 sox10 other upstream 78952 106723 ~ 123738 (+)

Expression


Co-expression Network