G287614 (LOC106930827)


Basic Information

Item Value
gene id G287614
gene name LOC106930827
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172695.1
NCBI id APWO02002293.1
chromosome length 373183
location 145001 ~ 145794 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU395352
CGAGGTTGGCAAATGTAAACAAACCCCGGAGGAGTGCATTCATTAAGTTGTACAAAGTCATTTGGTTGTTGCCAGGTCTCAGTTAAACAGAGAAAGTCAAGCTTACGGTCGATGAGGAGATCCTGGATGAGATGTCCCTTGCTTGTGAGTGAGCGAATGTTAAGAAGACCGAAGTTGACAGTGGAGTTGTCTGGTTTGCCGGGGGTGTTAGCCGACCGGGCTAAGCAGGCTAGCACACTGTGGTCAACAGCCCGGCTGTAGTTGCGAGATGGACGGCGAGAAGTGGACAGATgggatttttatttctttcgtTGAGTCCTCGTGGAAGTTTCGGCGAGATCCGCGGTGGATGTATCTCCGGCGGGGAAGGAAAGCTGCATCCGAATGGAGGAGTAGTGCAGCCGACGGAGGATCAGACAGTTGGTACCGCAGCCGGAGGAGTTCAGCAGCGGAGTACTGAAGCAAGCCCGTCGCGGGTTGGTGAACAAATGCCAGGAGAAGCCACAGAAGCACGGACCAGATGTGGGTCATGCCGGTCAACATTGTGATCGAGGACTCAGGTAGCTTGATCAGGTGCGCAGAGGCAGGTCGCAGGACCAAAGACCGTAGGACagcttaaaaaatacaaatattaaaattccGGGGGAGCAACGGCAGCAAGTCGCGCCAGCGTTCACTCTAGAACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106930827

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395352 True 686 lncRNA 0.53 2 145001 145794

Neighbor

gene id symbol gene type direction distance location
trnat-agu_40 NA coding downstream 129901 15027 ~ 15100 (-)
trnar-ucu_34 NA coding downstream 130081 14831 ~ 14920 (-)
trnat-agu_39 NA coding downstream 130480 14448 ~ 14521 (-)
trnar-ucu_33 NA coding downstream 130660 14252 ~ 14341 (-)
trnat-agu_38 NA coding downstream 131059 13869 ~ 13942 (-)
LOC103039499 NA coding upstream 193030 338824 ~ 346491 (-)
G287604 NA non-coding downstream 90814 53939 ~ 54187 (-)
G287603 NA non-coding downstream 99139 45630 ~ 45862 (-)
G287618 NA non-coding upstream 33638 179432 ~ 179704 (-)
G287633 NA non-coding upstream 43023 188817 ~ 189203 (-)
G287630 NA non-coding upstream 68838 214632 ~ 215634 (-)
G287645 NA non-coding upstream 101888 247682 ~ 247934 (-)
LOC103039290 klhdc3,LOC102795532 non-coding upstream 210459 356253 ~ 362780 (-)
G287664 LOC107554731 other upstream 160596 306390 ~ 307501 (-)

Expression


Co-expression Network