trnat-agu_40



Basic Information


Item Value
gene id trnat-agu_40
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172695.1
NCBI id APWO02002293.1
chromosome length 373183
location 15027 ~ 15100 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>trnat-agu_40
GGCGCCGTGGCTTAGTTGGTTAAAGTGCCTGTCTAGTAAACAGGAGATcctgggttcgaatcccagcgGTGCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-agu_40 True 74 tRNA 0.55 1 15027 15100

Neighbor


gene id symbol gene type direction distance location
trnar-ucu_34 NA coding downstream 107 14831 ~ 14920 (-)
trnat-agu_39 NA coding downstream 506 14448 ~ 14521 (-)
trnar-ucu_33 NA coding downstream 686 14252 ~ 14341 (-)
trnat-agu_38 NA coding downstream 1085 13869 ~ 13942 (-)
trnar-ucu_32 NA coding downstream 1265 13673 ~ 13762 (-)
LOC103039499 NA coding upstream 323724 338824 ~ 346491 (-)
G287603 NA non-coding upstream 30530 45630 ~ 45862 (-)
G287604 NA non-coding upstream 38839 53939 ~ 54187 (-)
G287616 NA non-coding upstream 129084 144184 ~ 148507 (-)
G287614 LOC106930827 non-coding upstream 129901 145001 ~ 145794 (-)
G287618 NA non-coding upstream 164332 179432 ~ 179704 (-)
G287664 LOC107554731 other upstream 291290 306390 ~ 307501 (-)

Expression



Co-expression Network