CI01000014_00717217_00743333 (JADE2)


Basic Information

Item Value
gene id CI01000014_00717217_00743333
gene name JADE2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000014
NCBI id null
chromosome length 1317303
location 717217 ~ 743453 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000014_00717217_00743333.mRNA
GTCATGTGACCACCTGGTCACGGTCTTCAAAGAACACAGGGACCAATAGCACATGGGTACGCCATGAGCAGAAGAAACCATCTGAGGTGTTTCGGACCGATTTCATTACAGCCATGAAGTTGCCTGATTCAGCACAACTGAGCCCAGAGGAGTTTTATTTCCTGTCCGACCCCTGGAGGCAGGAATGGGAGAAGGGTGTGCAGGTGCCAGCCAATGTGCAATCCATTCCTGAGCCTGTAGTCAGGGAGCTTCCTGATGTCAATCGAATCCCATTCTTTTCACCAATCCAAACCAGGGGCCAGTCCGAGTTTGGCTTCGGAGAGTCACATGGTCTCACTGAGCCACTGAGTCGCTACGATCTGGATGATCTGGATGTGACCTGGCTTGAACTGGTTAATACTGAATTCAGACAGTTAGCACTTCCGGAGCTGGACGAGCTCACCATGGAGCAGGTTGTGGTGGAGCTGGAGAGCAGGTGTCAGCAGAACATGCAGCAGGCCATCGAGACTGAGGAGGGGCTGGGCATCGAATACGACGAGGACGTAGTTTGTGACGTATGCCGCTCACCTGAGGGGGAGGACGGCAACGAGATGGTTTTCTGTGACAAGTGCAACGTTTGTGTGCACCAGGCATGTTACGGGATCTTAAAGGTGCCGCAGGGTAACTGGCTGTGCCGAACATGTGCTCTTGGAGTGCAGCCCAAATGTTTGCTCTGTCCCAGGAGAGGAGGAGCTCTGAAACCCACTCGTAGTGGAACCAAGTGGGTCCACGTCAGCTGTGCCTTATGGATCCCTGAGGTGAGCATTGGCTGCCCTGAGAAGATGGAACCCATTACAAAAGTATCACACATCCCGGCCAGTCGATGGGCCTTGTCCTGTAGCCTGTGCCGTGAACACACTGGCACATGTATTCAGTGCTCCATGCCATCCTGCGTCGTGGCCTTCCACGTGACCTGTGCGTTTGACCACGGACTAGAGATGCGCACCACTCTGGCGGAGAACGATGAGGTGCGCTTCAAATCGTACTGTCTAGAGCACAGTAGCGTCTCGCGCTCAAACAGTGGCGCTAATGCAGACCGGCCCGAACCGCGGCACGCTGGGCCGGATCTGCCAGGGATCTCTCATTCGGATCGTGCGAAGCAGGAGCAAGCAGAACAGGAGAAAGCCAGCCATCGCAAGCAGAAGCTGCAAGAGCTTGAAGACGAGTTTTACAGATTAGTGGACCCCAAGGATGTTGCGGAAAGCCTTTCCCTGCCAGATGCTCACGTGGACTTCCTCTTCCAGTACTGGAAACTGCGACGAAAGGCCAACTTCAACCAGCCGCTGGTGACCATCAAGAGGGATGAGGTGGACAATCTCGCCCAGCAGGAGCAGGATGTTCTGTATCGCCGTCTGAAGCTCTTCACTCACTTGCGTCAGGATCTCGAGAGGGTCAGAAACTTGTGTTACATGGTCACACGCAGAGAGAGGATCAAACACTCTTTATGCAACCTGCAGGAGAAGATCTTTGCCTTGCAGATTCAGCTCTTAGAGAAGGACCTGGATGGAGTCCGTATCCAAGGAGCCGGCGAGGAAAACGAAAATGAAATTGAACTTTTGTTACCCTCCAAAGCTAAGGAAATTGTTGAAAAAAAAGTATGTCACAGAGATGAGTCGGTGAGGATGAGTCGCTTGGAAGACAAGAGCGGGCAAATTCGAGCAAAATGGGAAAGTGCAAATTTAGCTCTCAGTAGCTTGAAGATGAACAGTTTTGGAGATAAGTTAGAAATAACTAATGACAGCAATGAAGCCAAGTGCAATTTATGCAAGACGTATAATTTGGAGAAAACTCTGAGAGGGGAGAAGATTCATCGCAATGGAGTCAGGGAACGAGTAAAAGAAAGGAGGAAGAGCAGTCCAGAAAAGAAGGACAAATGGAGATCAGACGACAACTCTCTATTCACCCAGCTGGGTTTCTCCAAATCCTTTCCACTGGAAGGCTCACTGTTTGACAGCTGGCTGGCTCAGTCCGTTCACATCACAGCAGATAACATGCTGAGCCAGTGGTCTCTATCCGGAGAGAGCGACGACCCGTCCGCCAGCCTCCTGTCAGACCAGCTCCTGCAGGGCGAGGAGAGCCTGCTCAGCCTGATGATGGACCACTCCATGAAGTCCACCTGGAAAACACCTCAGCTGGGCCGCAAGGCAAGGGGCGGGCCACGCAACCGCAGGAAGTCCGTCTCACTTCCACGGATCGGATCCGCAGTTAAAAGCAAGGTTTGGTCTGAGGACCAGCGGCCCAAACGAGGAGAGAGAATGCGCCATCTCCAACACCATCACAACCGCGCCGAGGGCAGGTCGGACCCTCTGCAGCCAGCCATCTCCAAAATGGACTCGTGCCACATTTCCGAGGAGCATGGCTCTTGGGATGGCGGCACGGACGCTGGGGATACGGAGAGTGGCAAGCGTTCGCAGATGGCCTTACGTCTACGTCTACCTAGACAGGGCAAGTCACGGTCTAAAAGTGAAACGACCCAGGCCTCGCTGCAGAACAGCACTGGGAACAGCACATCTGCACCGGACACTGAAACGGACGGCTATTTCTCTGATGCAGAACAGAGTGACAGTGAATTGCGCTCATCCAGCCGAAAGCTGCGCTTGCCCCAACTGCATGCTGGGAAGGAGCAAACGTACCAGCATCACGAGCAGGGCACGCTTCGGTGTAATCCTTGCGTGTACGTGTGTGTACCAGTGGACAGATCTGAGCACAGTTGGGTCAGTCTATCTCAAGTGGTCCAAAAATGGAGCTTTAGGAACATCTTGAGTCAAGACAGTTTCCGTAAACGTCCATATAACACAAAATTTGTTGGGAGACATGACACAAAGACAACCGCTGTGGTCAAACCAAGGTTAAAGAGAAGAAGTGATCGCAATCATCTGAAAAGTTTAAACCTGTACATTCTTTGGCAAAGCTTCAAGTGTGTTGAGAGGATCTTCTCACGGTATGATGATGAAACACTGAGTTTCTTTTCTTTCTTTCTTTTGTATGATGATGCCAAAGAAAAACCTGAGGGAACAACTAAGGGTTAGTCCACCCAACAGCGGGTTAGTCCACCCAACAAGGACAGTTCTCTCACCATGTATTCAGTCTCATGTCGTTCCAAACCCGTATCAATGTTCCTTTCCATGTAGTGAAGGTAAATGGGTCCA

Function

symbol description
jade2 Predicted to enable metal ion binding activity. Predicted to be involved in histone H3 acetylation; histone H4-K5 acetylation; and histone H4-K8 acetylation. Predicted to be part of histone acetyltransferase complex. Orthologous to human JADE2 (jade family PHD finger 2).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000014_00717217_00743333.mRNA True 3188 mRNA 0.52 16 717217 743453

Neighbor

gene id symbol gene type direction distance location
CI01000014_00688079_00693236 UBE2A.L, UBE2A, UBE2B, UBE2AL coding upstream 23746 688079 ~ 693471 (+)
CI01000014_00630596_00647190 TCF7 coding upstream 68225 630133 ~ 648992 (+)
CI01000014_00598970_00627308 NA coding upstream 89818 597337 ~ 627399 (+)
CI01000014_00413799_00415245 FSTL4 coding upstream 301875 413799 ~ 415342 (+)
CI01000014_00406242_00410963 NA coding upstream 305962 406242 ~ 411255 (+)
CI01000014_00898542_00925988 GALNT10 coding downstream 155047 898500 ~ 926227 (+)
CI01000014_00939523_00954114 LARP1 coding downstream 196070 939523 ~ 954310 (+)
CI01000014_00974308_00976120 NA coding downstream 230855 974308 ~ 976235 (+)
CI01000014_00989016_01007020 NA coding downstream 245073 988526 ~ 1007076 (+)
CI01000014_01032668_01033192 NA coding downstream 288557 1032010 ~ 1033192 (+)
G86091 NA non-coding upstream 32429 683847 ~ 684788 (+)
G86042 NA non-coding upstream 56734 622902 ~ 660483 (+)
G86079 NA non-coding upstream 153801 563126 ~ 563416 (+)
G86076 NA non-coding upstream 157809 558693 ~ 559408 (+)
G86075 NA non-coding upstream 158531 558362 ~ 558686 (+)
G86109 NA non-coding downstream 25604 769057 ~ 769268 (+)
G86132 NA non-coding downstream 133020 876473 ~ 876913 (+)
G86151 NA non-coding downstream 235803 979256 ~ 980176 (+)
G86164 NA non-coding downstream 238507 981960 ~ 982673 (+)
G86165 NA non-coding downstream 242661 986114 ~ 986494 (+)
G86111 NA other downstream 26771 770224 ~ 770983 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019220 jade2 coding NC_007132.7 CM002905.2 45386033 ~ 45410625 (+)