trnal-aag_8


Basic Information

Item Value
gene id trnal-aag_8
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172914.1
NCBI id APWO02000140.1
chromosome length 931882
location 64550 ~ 64631 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-aag_8
GGTAGCgtggccgagcggtctaaggcgctggaTTAAGGCTCCAGTCTCTTCGGGggcgtgggttcgaatcccaccGCTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-aag_8 True 82 tRNA 0.65 1 64550 64631

Neighbor

gene id symbol gene type direction distance location
trnal-aag_7 NA coding upstream 3060 61409 ~ 61490 (+)
trnal-uag_5 NA coding upstream 3612 60857 ~ 60938 (+)
trnal-aag_6 NA coding upstream 10989 53480 ~ 53561 (+)
trnal-uag_4 NA coding upstream 11371 53098 ~ 53179 (+)
LOC103044777 gas7,LOC107653998,LOC107719691,LOC107670554,LOC107742591 coding upstream 22780 7777 ~ 41770 (+)
LOC103046004 rcvrn,rcvrnb,LOC107720397 coding downstream 63827 128458 ~ 132755 (+)
LOC103046818 gsg1l2,LOC108424863,LOC107653939,LOC107556458,LOC107742606,LOC107387200,LOC107095327,LOC103365387 coding downstream 171173 235804 ~ 250498 (+)
LOC103028075 mprip,LOC108273748,LOC102297471,LOC105888873 coding downstream 253498 318129 ~ 369316 (+)
abcc3 abcc3,LOC106589510,LOC107653990 coding downstream 467661 532292 ~ 603116 (+)
LOC103024700 LOC108443184 coding downstream 550387 615018 ~ 619129 (+)
LOC111191821 NA non-coding downstream 233722 298353 ~ 301587 (+)
LOC111191824 NA non-coding downstream 319798 384429 ~ 391232 (+)
LOC107197834 NA non-coding downstream 326621 391252 ~ 409186 (+)
G331526 LOC108273747,LOC103382276 non-coding downstream 375622 440253 ~ 444193 (+)
LOC111191818 NA non-coding downstream 568185 632816 ~ 640112 (+)
G331504 NA other downstream 202236 266867 ~ 267760 (+)
LOC103021777 LOC108424855 other downstream 306859 371490 ~ 382784 (+)

Expression


Co-expression Network