G59341


Basic Information

Item Value
gene id G59341
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 46182741 ~ 46186894 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU79995
TGGAGGTCAAcataagattttattttattattttaactcattttggTCCATATATCATGAATATATACAatgcaaagaacaaaaaaatcatgAGGGATCAAATCTCTGTTCTGAGCTGAAGGGTGATGTTCTTCATCTTCTGTTTGTAGTGTTCATCAAACTGGTCGTTCTGAGTGGCAGTGAAATGATTTTTCCAGTCCCCGACTTTCCTTTTCGCATGAATGGTGAGATCTTGAAATCCATAATAGGGATTGTGGAGTAGTTGGTCATTGTgttctgcttcatgttgtcgaAGTGAACATCTTTTGTAATTTTCTCTCTGACTTCTGTTGGTATAGATAAACCAAGGAAGGAGCACAAACGTGCCACCTCACGTCCAGTATCCTAAGCAAGATAGAAACAAATGTTCAAAGCTCTAATTTTAGTCCTACAgctatatacatatttaaaaaaaaaaaaaaattggttaaatgttttagtttcaAAAGCTGCCTTACCTCCACCATGTCCTCAAAGAACATATAGTGAATAGTCTGCTTCTTCTCCCAGTATCCACACACATGATCATACCAAGGACCAAAAACCTCTAGAAAATAAGATGAAAGAAATCACACAAGCTTCATTAACTCATTCTTCTATTGACCATtcttctatctgtctgttgTCACTGGCTAACACAATTTATCTCCCATGCCCCCATGCCTAACAATTGGGAAGGGGTGCTTTTCATCAAATGCTGTTCTCATTCCTTATTCAAACCATTCAGACCACATCTCTgatgctcatcccagcatacaAAGCACTCATCAGGTGTGCCAAAATCAGAAGAAGCAACTGACAACCTGccctccaggagccatctctgctcttcaggactgttttgagcacactgactgtTTAGATAAGCTGCTACTTCTGATGACTCTATCAACCTGGAATCAGTAATTGGCTACATTAGCAAGTGCATTGATGATATTgctgtctccaaaaccatcacaacaCACCTCAACCAGAATCtgtggatgactgcagaggaGCATGTGCTGCTGAGAACCTGGCACAAGGCCTCAGGGGACAAGGGAGCCCTCAGAACAGCCAGAGCCAAGCTCTACCGAAGTTTTAGAGAGGCAAAGTGCACCTACACAAAAAGGCCATCACAAACTACAAGACACCTGCACTTTCACCACAGTGATACCTCCTTTCCAGATGCGCTAAACACCTTCTACACAAGGATtgaagcacagaactacacgacaaGGAAGACCACACCTCCTCTAAACGACCAGGTTCTGTGCCTGTCCTTAGCTGATGTGCAGagaactctactcagagtcaacccattGAAAGCCCCAGGAACAGAGAGCATACCTGgaagagtgctcagaggatgtgcagaccagctcacagatgttctcacagacattttcaacatttctCTGAGCACTGCAGTCATTCCGATGTGCTTCTAGGCAACCATCATCGTTCCTGTGCCAAAGAAAACTTTGTGAAAGATGCCTCAGTGACTATCGTaccattgcacttactcccttcataatgaagtgctttgagaggctggtcatgaggcacatcaaaaaccagcctccactaccagactcagCAACAGCTTTGTCCACctggcagtcagactcctcaacacacacagaccccaTCACCACCACTACCATAACACACCCAAACGCACTcgcagaactgaactgaacttcctcaccactcttcacacacacaaacacacacacacacaactcttaGCACACAAAACTGAAATGTCTCTATCCCTATCAGCAATACTTCTTTCAAAAAAACTATGTGAGTTCATTGTGCTGCTCACTAGCCTAACTAACTTTTCTTGgttgttttatgtttactataaacatataatacaACACAAAAGATGAATTcctatttaaatgaaattacatttcttttaaagttatacAATGGTCAAAAGACTGTGATGCTCCTGGCTCGCGGCTTCTGGCGTCTATGCGTCATTACGCTTATATAGTGGagttattagccaatcagattacaGCATCACACAAAATTTCTGTTAAATATTACCTAAGTATTAAATCCACATCACAACAATATACAACTTTAACCAAACCAAAGAAATGGCTCTAACAAcctataaactctctacctcagtaactgctaaCTGTAACTGCCttatcatggtttaaatcatacttaactGATcgttatcagtttgtgaggataaatgatatgtcttccagttatactaaagtaagatatggaattccacaaggctctatattaggaccgttattatttacattatatatgctcccactgggcaaagttattagaaaacatgatgtaAATTtccattgttatgcggatgacactcagctcttcatatcagccaaacctgatgacagagtcagattaaagaaaatcgaggattgtgtaaaatatgtgaaattgtggatgttgcacaacttcctcctattaaacagtaataaaacaaaagttcttctattaggccccaaagctgctagaaatactttagttaggctgttttatttagatctgccagagtcattagccacactctgatactgttttatattttctgttttacgtaaatccagtcaaaactaattccatctctctgacttcatccgagttactgactgcccacctgtctgacctgaTACTggtggatgttggaccctcaggatcacgtctcctgtccggccagactgatggaagtttctgaagtcagctcttctccatcacccacccaccacagatcagccgCTCATCATCTAtctcactctccactacagattacatccaagccattagtggcgctattatactcctgaatatataaaacctatgtggatgtataaaagactttttaaattttaatttaaaagccgtttggccagtggtaggatggtccccccttaaatgtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctccgcgctcactgggggttctgttttctgtattttctatgtttaatgttttgcttaattctttgtcctgtgatcatgtttctgtaaagctgctctgtgccaacaccagttgtaaaaagcgctatacaaataaattagattttatttgatttgctgtgattatatatgttctatatgtcacagtatgttacacatctctgcaccttatcctcactatacacatttttataccgtatcggtactgcactgtcctgtctgttaaattgtctcttttttgtattgattttatttattgtagtgttatgaTTTTATTGTTACACTTTTGCACTTTGTTTCTCTATTGTATTGTTGtcgtacctgtactcagatgtaataataataaaagtctgTTGACTTGAGTTGGTTCCATCCAACTCTGACTATTCCTATGAGCATGAATAATTCTATGATTATTgctatgagcatgctggccagtgtttaatgAGCTGAAttcaacaacaataaaataacaataggTGTCTTTCTTGACATATCCAAAGCATTTGACACAGTTATTCATAGTATCCTCTTACAAAAGTTACAATACTATGGTGCTCATAACATGGAATTAGAATGGTTTAAAAGATATCATCACAGAGTGTGTTTCATGGCAGGGCACTTGCTCTAATCTCAATTTTAGGACTCttactgtttttaatatacGTAAATGATCTTTACATGGTAGCAAAAGACtaccaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79995 True 3767 TUCP 0.39 3 46182741 46186894

Neighbor

gene id symbol gene type direction distance location
wdr46 NA coding downstream 61349 46073492 ~ 46121392 (-)
mrps25 mrps25 coding downstream 159364 46013677 ~ 46023377 (-)
tmcc1 tmcc1 coding downstream 380614 45742046 ~ 45802127 (-)
plxnd1 plxnd1,LOC107565410 coding downstream 460607 45614366 ~ 45722134 (-)
mbd4 NA coding downstream 635578 45537810 ~ 45547163 (-)
LOC103038626 NA coding upstream 30322 46217216 ~ 46243307 (-)
brpf1 brpf1 coding upstream 69254 46256148 ~ 46280842 (-)
LOC103038317 LOC108432102,LOC107565403 coding upstream 107212 46294106 ~ 46384471 (-)
LOC103024909 LOC108442356 coding upstream 238053 46424947 ~ 46448639 (-)
LOC103034958 NA coding upstream 263962 46450856 ~ 46462765 (-)
G59307 NA non-coding downstream 88922 46019881 ~ 46093819 (-)
G59314 NA non-coding downstream 194143 45987352 ~ 45988598 (-)
G59292 NA non-coding downstream 209394 45917076 ~ 45973347 (-)
G59092 NA non-coding downstream 281331 45900682 ~ 45901410 (-)
G59090 NA non-coding downstream 284839 45893312 ~ 45897902 (-)
G59370 NA non-coding upstream 244338 46431232 ~ 46438072 (-)
G59402 NA non-coding upstream 410819 46597713 ~ 46598505 (-)
G59404 NA non-coding upstream 412319 46599213 ~ 46599546 (-)
G59422 NA non-coding upstream 630450 46817344 ~ 46817604 (-)
G59435 NA non-coding upstream 689674 46876568 ~ 46902785 (-)
nr2c2 nr2c2,LOC107757055,LOC107549572 other downstream 133168 46025291 ~ 46049573 (-)
G58868 NA other downstream 1121067 45061109 ~ 45061674 (-)
snrnp200 snrnp200,LOC107686403,LOC107602857,LOC107667532,LOC107600001,LOC108265067 other downstream 1560667 44586306 ~ 44622074 (-)
G58678 NA other downstream 1705075 44474159 ~ 44477666 (-)
G58649 NA other downstream 1814373 44367900 ~ 44368368 (-)
LOC103023429 LOC103023429,LOC108442352,LOC108265644,LOC107594970,LOC107549568,LOC107684464 other upstream 416350 46603244 ~ 46681925 (-)
LOC103040795 LOC108412055,LOC108265574,LOC105899021,LOC108412246 other upstream 1009757 47196651 ~ 47414434 (-)
LOC111192697 NA other upstream 1262064 47448958 ~ 47451392 (-)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other upstream 1629461 47816355 ~ 47919414 (-)
LOC103030200 cacna1e,LOC108265205,LOC108265123,LOC108265206 other upstream 2875625 49062519 ~ 49192025 (-)

Expression


Co-expression Network