CI01000016_03628266_03631245


Basic Information

Item Value
gene id CI01000016_03628266_03631245
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3628266 ~ 3631927 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03628266_03631245.mRNA
ATCTTGAGACGACTACTTCCTCTGAGAGCAATACCTTGGAACCCTTTGAGATGTTTCCTGAAGGTTCTGGAGGATCTGGAGAAGATCCTGGTGTAGGATCAGTAGTAATAGTTGGAGCTGATGATATTGGACATGCTACTGCGTGGCTGTATGTGTCGTGTGTTTTTGGGCTGTTTTTTCTTGTAGCCCTCACCATGCTCACAGTCTTTTTCTTCAGGAATAAGCTGCATTTTATGTCTAGATTAGGAAAACAGACTTTGCCCTTTACGTTGCTCCTTCATTCCTCTCGCCCTTTTCCCGCTCCTGCTGCCTCTGAACAGCTTCCAGAGGAGGGAAAGTCACTGATGTCACCTCCCAAGCACAGCCTGCAACACTTCCTTCCTGTTGAGCAGGAGGGCATTCATCTGCATAACATGGATTATTTCCTGTCTCCAGGGTCTGAGAGTGTGAGGGTCTGACTGAGGGACAGACATGAGTAGATGAAACCTCACTGTAGTAGATACACTGTGATTGACTAAAGGTCACACACTGTGTCTTTGTTATGGTTCAATAACAGTATTATGAGTTTGTAAAAAAAAATTGTATACAAAGTAATTCACTATCCTTTCTCGATATTTTTGACTCCTTTCAAAACTATTTGTAAATAAGTATTTTTAAAGCAACTTCTACAAAATGACCATCTGTTGGGCAGTCTCACATGTGAAGCTAAAGCACTTTTTATAAGTTGCTCTGAATAAGAGTGTTGGCTAAATGCCTTACAGGAATGTTACAGGTTCAGTACAAGATAATCTTATTCAACACACACACAAATGATAATGCTAATGATACAGTGTAGATTTTAACATTGACAGATTTGCCCCATTCACTTCCATTGTTAAAACTTTTTAAACTTTTTCAAATGTGAAAATGGCATACAATCATGTATAATTTGCAGTGCTGAATTATATTTTAATTTCTGTCTGTACATTGCTTTTTAAAATGCATATTGTTCCAGCTTTATAAAGGATAGTGACTTACAAACCCCAAAAAAGTCAAAGGTGACAATGGAAAGAATAATCCTTTCAAGTGGTTGTGTGAGATAAGGGAGAACAAAGATCTTGGCAGATCTTGGTTAACACAAATTTGAACAAATTTCTTCAA

Function

NR:

description
TPA: interleukin 6 receptor alpha

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03628266_03631245.mRNA True 1140 mRNA 0.38 4 3628266 3631927

Neighbor

gene id symbol gene type direction distance location
CI01000016_03592692_03617887 ATP8B2 coding upstream 10307 3592620 ~ 3617959 (+)
CI01000016_03572467_03575117 AQP10A coding upstream 53079 3572467 ~ 3575187 (+)
CI01000016_03565923_03571228 NA coding upstream 56629 3565000 ~ 3571637 (+)
CI01000016_03559585_03560912 NA coding upstream 67176 3559326 ~ 3561090 (+)
CI01000016_03546616_03553250 TUFT1A coding upstream 74517 3546616 ~ 3553749 (+)
CI01000016_03638070_03640560 NA coding downstream 4863 3636790 ~ 3641199 (+)
CI01000016_03726678_03729904 NA coding downstream 94516 3726443 ~ 3731010 (+)
CI01000016_03767260_03771612 NA coding downstream 135333 3766998 ~ 3771828 (+)
CI01000016_03780734_03792228 NA coding downstream 148520 3780447 ~ 3792416 (+)
CI01000016_03798165_03803686 NA coding downstream 166110 3798037 ~ 3804627 (+)
G95524 NA non-coding upstream 97329 3530583 ~ 3530937 (+)
G95522 NA non-coding upstream 99711 3528024 ~ 3528555 (+)
G95521 NA non-coding upstream 104178 3523721 ~ 3524088 (+)
G95520 NA non-coding upstream 104906 3523150 ~ 3523360 (+)
G95518 NA non-coding upstream 116624 3511408 ~ 3511642 (+)
G95494 NA non-coding downstream 1708 3633635 ~ 3633998 (+)
G95533 NA non-coding downstream 37778 3669705 ~ 3727497 (+)
CI01000016_03965750_03967383 NA non-coding downstream 302310 3965498 ~ 3967397 (+)
G93406 NA other upstream 2700734 905400 ~ 927532 (+)
G95439 NA other downstream 230248 3862175 ~ 3862305 (+)
G95648 NA other downstream 640709 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1202631 4829592 ~ 4837457 (+)
G95792 NA other downstream 1587953 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1773942 5405791 ~ 5407963 (+)

Expression


Co-expression Network