CI01000016_03559585_03560912


Basic Information

Item Value
gene id CI01000016_03559585_03560912
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3559326 ~ 3561090 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03559585_03560912.mRNA
GTATATAAACTTACACCAATACCACTGTCTGTCATTGTTCCAAACCACAATGCTTTCCTGTCATCTTTTCCTCTGTGTGAGATTATAGCTCTCTAGGAGCTCACAAGCCACATGCACATGTACTGTCAATGCATCCAAACATTATGCACATGGTTTTTCAGTGTTCGACTTGTTTCTGTTGAAATGAAGTGAGCGGTGTCAGAACAGCTGACATAGTGGATAGCTGACCTTTATCAGATCAACACATTGAACGTGAACAATGACACCAATTCTTTCAGAAGGAACAGAGGTGGGTGGCAGATGCATGAAAAGACAACAAGGAATGAAATTGTTTTCCCACAGTCTGCATGTGTCTGTGATGCAAGACAGACCGTTGAAGGATGATGGTTACTGCACATGTACAACCGCTGTTAAGCCTCTGAGCAGCTTCTTTTGCAGCACTCTTCATTTGCTCTTGCAGCTGCAGGAAGTTGAGCAATTCAGCCCACAACTGTGCCACAGAATAACAACCAGGTCGTGTATGATCAGTTTTGCTTTGTATTGTGGCCTCCATCTACAGGCCCCTGTATCTTGAATTTATGTAAATGATGCTTGATGACGACTAACAGGTTAAAAAAATGCTCATGCAGTAGCTGTTTGCAAAGATGTCCTTGGCATTTCTGGGTCATGGTTTGCAAGATTCTAAAATTATGCAGTCTATTATTCAGCTGGTGCTTTTGGTTTCAGTTGAAGCATCGGTCAATGCTAGTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03559585_03560912.mRNA True 752 mRNA 0.42 4 3559326 3561090

Neighbor

gene id symbol gene type direction distance location
CI01000016_03546616_03553250 TUFT1A coding upstream 5577 3546616 ~ 3553749 (+)
CI01000016_03503738_03504907 NA coding upstream 54419 3503672 ~ 3504907 (+)
CI01000016_03267301_03268376 NA coding upstream 290935 3265145 ~ 3268391 (+)
CI01000016_03190518_03261836 NA coding upstream 297083 3190166 ~ 3262243 (+)
CI01000016_03158359_03165518 NA coding upstream 393504 3158359 ~ 3165822 (+)
CI01000016_03565923_03571228 NA coding downstream 3910 3565000 ~ 3571637 (+)
CI01000016_03572467_03575117 AQP10A coding downstream 11377 3572467 ~ 3575187 (+)
CI01000016_03592692_03617887 ATP8B2 coding downstream 31530 3592620 ~ 3617959 (+)
CI01000016_03628266_03631245 NA coding downstream 67176 3628266 ~ 3631927 (+)
CI01000016_03638070_03640560 NA coding downstream 75700 3636790 ~ 3641199 (+)
G95524 NA non-coding upstream 28389 3530583 ~ 3530937 (+)
G95522 NA non-coding upstream 30771 3528024 ~ 3528555 (+)
G95521 NA non-coding upstream 35238 3523721 ~ 3524088 (+)
G95520 NA non-coding upstream 35966 3523150 ~ 3523360 (+)
G95518 NA non-coding upstream 47684 3511408 ~ 3511642 (+)
G95494 NA non-coding downstream 72545 3633635 ~ 3633998 (+)
G95533 NA non-coding downstream 108615 3669705 ~ 3727497 (+)
CI01000016_03767260_03771612 NA non-coding downstream 205908 3766998 ~ 3771828 (+)
CI01000016_03798165_03803686 NA non-coding downstream 241450 3798037 ~ 3804627 (+)
CI01000016_03965750_03967383 NA non-coding downstream 373147 3965498 ~ 3967397 (+)
G93406 NA other upstream 2631794 905400 ~ 927532 (+)
G95439 NA other downstream 301085 3862175 ~ 3862305 (+)
G95648 NA other downstream 711546 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1273468 4829592 ~ 4837457 (+)
G95792 NA other downstream 1658790 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1844779 5405791 ~ 5407963 (+)

Expression


Co-expression Network