CI01000016_05374626_05378364


Basic Information

Item Value
gene id CI01000016_05374626_05378364
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5373845 ~ 5386465 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05374626_05378364.mRNA
AGGTCCTTGTTTTATAAGGCAGATATGTTGCAAATAAATACGCAGAAAAATAAATAAATAAATAAACAAAAGTATAAAATGAATAAATAAATGAAGCTCCAGATGTTGTCACGTGCTCCAAAGTTCGTCTCTCTCTCTCAGTATCCGCGCGAACGGCTCGCGACAGTAGTTTACAGAGGAAGAGCGTGAGGTGAGGAGGAAAATGAATGAATGACAGAAGTGCAGAAATAACGAGAACAAGAAAACCGTACCAAAACCTGACTGTGTCCAGTCCCAATAGTTGTTTAGTTTTAACAAACGCGAGTGAGGATGGAAAGATACACGGCGAGGGTCAGAGAGGTGTATGGAGGGAGAGACAGAGAGAGAGAAGGATGCGAGGTCCGTCACATCACCGAACGCACCAGAGGAAAGACCGGTAGTCTGAGCTCGGTAGTCACAAACCTCACAGACATTACACCAACTCCCACACACTCCTCGATCACGGGGGAATGTTTCGGGCCATATAATTATGATTGTTACGTGCAGGACTGCATATCGCCACCTCAGTCATGAACACACACACACATGTTGGGTTTTCATGTTTTATGGGGACATTCCATAGACATAATGATTTTTATACTGTACAAACTGTATATTCTATCCCCTAACCCTAAACCTATCACAGAAAACTTTCTGGATTTTTACATTTAAAAAAAAAAAAAAAAAAAAAAAAATTTTGTATGATTTATATGCGGTTTTCCTCAAGGGGAACAAAAAATGTCCCCACAAGGACAAGGATTTTGGATATTGCCATCTTTGTGGGAACATTTTGTTCCCATAACGTATGGTATACTTGAACCACACAAACACACACACACACACACACACACACACAGACAATATCAATAGTTGGCAGAGCATCATATGACACTAAATACCTGCAAAAGCATGATCTGATATAATTGAATCATTTCTCTAAACCCCGAAGGGAATTTCAGAGGTGTTGAGAAAGAAATAAGGAAAAAAGAGTGAGAGTGACTGCAGATGAATGTGTGTGCGTGTGTGGGAGGATGTATAAATACAGTGAAAAAGACAGATAATTCTTATGACAGACAGGATGTTGTTCATGTCCTTTGACCCTCGCTAACTGCTCCCACTCTTTGTATGGCAGAGAAGAAAGAGGTGTGTCCTGACCAACCACGATCTGGCAAGACCCCTTCACCTTTCCCAACCCGTGCACCCCTCTACAGACGTCAGAGAGCAACTGAGTGTGTTAATGGCTCTATGGGAAAGCAAAAGGGGGGAGAGAGAGAAAGAATGACACACCGCAGGAAGATAATCATTGGGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05374626_05378364.mRNA False 1333 mRNA 0.42 3 5373845 5378673

Neighbor

gene id symbol gene type direction distance location
CI01000016_05325805_05330265 COX6B2 coding downstream 40971 5325519 ~ 5332874 (-)
CI01000016_05313099_05322439 SLC2A3B coding downstream 50898 5312803 ~ 5322947 (-)
CI01000016_05249001_05286683 EPHB6 coding downstream 87162 5247560 ~ 5286683 (-)
CI01000016_05233964_05243756 NA coding downstream 129477 5233656 ~ 5244368 (-)
CI01000016_05208242_05218239 NA coding downstream 154029 5207419 ~ 5219816 (-)
CI01000016_05412782_05415867 NA coding upstream 33575 5412248 ~ 5415906 (-)
CI01000016_05426889_05429942 NA coding upstream 47103 5425776 ~ 5429942 (-)
CI01000016_05461674_05464777 FOXJ2 coding upstream 83001 5461674 ~ 5464777 (-)
CI01000016_05468882_05473383 ISOC2 coding upstream 90090 5468763 ~ 5473383 (-)
CI01000016_05508930_05523828 CACNG8B coding upstream 129414 5508087 ~ 5523828 (-)
G97148 NA non-coding downstream 32045 5341039 ~ 5341800 (-)
G97012 NA non-coding downstream 169032 5192792 ~ 5204813 (-)
G97139 NA non-coding downstream 182417 5191026 ~ 5191428 (-)
G97135 NA non-coding downstream 250369 5123080 ~ 5123476 (-)
G97045 NA non-coding downstream 300317 5067684 ~ 5073528 (-)
G97160 NA non-coding upstream 23470 5402143 ~ 5402369 (-)
G97165 NA non-coding upstream 32982 5411655 ~ 5411920 (-)
G97180 NA non-coding upstream 174622 5553295 ~ 5553986 (-)
G97203 NA non-coding upstream 186524 5565197 ~ 5566153 (-)
G97215 NA non-coding upstream 187620 5566293 ~ 5573569 (-)
CI01000016_04921091_04922518 NA other downstream 450441 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 1442794 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 1708532 3647653 ~ 3675585 (-)
G95070 NA other downstream 2388204 2985260 ~ 2985641 (-)
G97341 NA other upstream 780313 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 3510160 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 3558116 8925960 ~ 8945229 (-)
G98679 NA other upstream 3856323 9234996 ~ 9239929 (-)

Expression


Co-expression Network