CI01000016_05398036_05400369 (NAT14)


Basic Information

Item Value
gene id CI01000016_05398036_05400369
gene name NAT14
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5398036 ~ 5400406 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05398036_05400369.mRNA
ATGCAGGAGAAGGACATTGAAGCTGTAAAGGCTCTCATCAAGGAAGGAAGTGAGGGAACGGAGAACCGCCTGATTCTTCACCTTCTGACCCGTCCACTCGCTCTCCTCATGCTGGCCACCCTGTCCTCCATCCTCCGCTGTGTGCTGCACTCTTTTATCATGGCCTTGGTCATTCCAGTCTTCCTTCTCATCATCTACCTCAAGCTCACCATCCCACGATCGTCTTGGTACCGCAGAGAGGGACTGGGCAGATTGCTGGTGCAGGGCCTAGAGTCCAAATCAAAGCAAAGTGGCATACGACGGGTCTATGCCCACGTACCATTCCCTTCCAGGGTGGGAGAAGCTTTCTTCAGGAGGCTGGGCTATCGTCTGCAGGGCGAGACTGCAGGGACTGAGGGAGAGGAGCAGGATGAGGATTATGAAGAGCCACAGAAGGGTTGGCTGGGGTTCCCTTTAACTAAAGTGTTTGTTAAGGATCTATAAGTGTCATTGAAACAAAAACTAAAGGCTTTAAACATAA

Function

symbol description
nat14 Predicted to enable N-acetyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human NAT14 (N-acetyltransferase 14 (putative)).

GO:

id name namespace
GO:0034848 naphthyl-2-oxomethyl-succinyl-CoA succinyl transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05398036_05400369.mRNA True 520 mRNA 0.51 3 5398036 5400406

Neighbor

gene id symbol gene type direction distance location
CI01000016_05388832_05396460 ZNF628 coding upstream 956 5388832 ~ 5397080 (+)
CI01000016_05381573_05383796 NA coding upstream 14218 5380917 ~ 5383818 (+)
CI01000016_05335334_05352325 RASIP1 coding upstream 45369 5335334 ~ 5352667 (+)
CI01000016_05229439_05231984 NA coding upstream 164877 5229339 ~ 5233159 (+)
CI01000016_05192890_05204267 TPI1.S, TPI1, TPI, TPI1B, TPI1A coding upstream 193277 5192782 ~ 5204759 (+)
CI01000016_05405791_05407797 AICDA coding downstream 5385 5405791 ~ 5407963 (+)
CI01000016_05445824_05454816 EPN1 coding downstream 45418 5445824 ~ 5455416 (+)
CI01000016_05475350_05482964 U2AF2, U2AF2A, U2AF2B coding downstream 74944 5475350 ~ 5483946 (+)
CI01000016_05488887_05502270 CACNG6B coding downstream 88481 5484205 ~ 5504239 (+)
CI01000016_05698858_05706081 NA coding downstream 298452 5698858 ~ 5706719 (+)
G95824 NA non-coding upstream 22769 5371328 ~ 5375267 (+)
G95814 NA non-coding upstream 68378 5327611 ~ 5329658 (+)
G95793 NA non-coding upstream 72121 5233196 ~ 5325915 (+)
G95871 NA non-coding downstream 11076 5411482 ~ 5411703 (+)
G95803 NA non-coding downstream 11832 5412238 ~ 5418215 (+)
G95876 NA non-coding downstream 20761 5421167 ~ 5421768 (+)
G95880 NA non-coding downstream 24963 5425369 ~ 5434373 (+)
G95801 NA non-coding downstream 57436 5457842 ~ 5458207 (+)
G95792 NA other upstream 172095 5219880 ~ 5225941 (+)
CI01000016_04829592_04837305 NA other upstream 561381 4829592 ~ 4837457 (+)
G95648 NA other upstream 1124131 4272636 ~ 4273905 (+)
G95439 NA other upstream 1534179 3862175 ~ 3862305 (+)
G93406 NA other upstream 4470504 905400 ~ 927532 (+)
G96389 NA other downstream 1760235 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 2383659 7783987 ~ 7784996 (+)
G97824 NA other downstream 2613957 8014363 ~ 8015775 (+)
G98288 NA other downstream 3595692 8996098 ~ 9002717 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location