Fish Transcriptome and Expression Database

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model fish

XLOC_007918 (CABZ01048945.1)

Basic Information

Item	Value
gene id	XLOC_007918
gene name	CABZ01048945.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007125.7
NCBI id	CM002898.2
chromosome length	52660232
location	29353007 ~ 29353123 (-)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015446
agccacagccatatcaccctgcatcccaagactggttactcactgaagctaagcagtacTGAGCCTGgtaagtacctggatggaagaccacataagaaaactaggttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000113381

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00015446	True	117	rRNA	0.47	1	29353007	29353123

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_007917	NA	coding	downstream	437821	28911909 ~ 28915186 (-)
XLOC_007916	NA	coding	downstream	756277	28594185 ~ 28596730 (-)
XLOC_007915	NA	coding	downstream	772199	28577473 ~ 28580808 (-)
XLOC_007914	insb	coding	downstream	784855	28563081 ~ 28568152 (-)
XLOC_007913	zgc:113364	coding	downstream	818444	28530153 ~ 28534563 (-)
XLOC_007919	NA	coding	upstream	348197	29701320 ~ 29701634 (-)
XLOC_007920	NA	coding	upstream	353581	29706704 ~ 29707043 (-)
XLOC_007921	pdlim3b	coding	upstream	429385	29782508 ~ 29800107 (-)
XLOC_007922	sorbs2b	coding	upstream	453974	29807097 ~ 29906209 (-)
XLOC_007923	mtnr1ab	coding	upstream	752488	30105611 ~ 30141162 (-)
XLOC_007641	CU855896.1	misc	downstream	26945167	2407736 ~ 2407840 (-)
XLOC_007640	CU855896.2	misc	downstream	26945576	2407328 ~ 2407431 (-)
XLOC_007639	CU855896.3	misc	downstream	26945935	2406945 ~ 2407072 (-)
XLOC_007910	CU019650.1	non-coding	downstream	1224729	28128158 ~ 28128278 (-)
XLOC_007908	NA	non-coding	downstream	1347744	27987463 ~ 28005263 (-)
XLOC_007925	NA	non-coding	upstream	944251	30297374 ~ 30298171 (-)
XLOC_007930	FP015860.1	non-coding	upstream	1158358	30511481 ~ 30536884 (-)
XLOC_007951	BX248522.1	non-coding	upstream	1973478	31326601 ~ 31326717 (-)

Expression

Co-expression Network