CI01000016_08570850_08582638 (MPP6, MPP6A)


Basic Information

Item Value
gene id CI01000016_08570850_08582638
gene name MPP6, MPP6A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8570293 ~ 8582907 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08570850_08582638.mRNA
AGTTTGGTGTGTAGAATAAACATCCATTATATAGGACACCAGTTAAGTCATATGTGCTTCTGTTGCCAGTGTGCTTTATTAATTTTCCCTTAATCATGTACATTATGGGCTATTTTTATTTTTTATTTTTTTTTTACTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTATTTATTTATTTATTTATTTATTTTTTATGTGTGACCCTCAGCCATGCAGCAGGTGCTGGATAACCTCAAGGAGCTGCCGCCGTCAACAGGAGCCAAAGACATCGACCTCATCTTCCTCCGTGGCATTATGGAGAGTCCCATAGTTCGTTCCCTCGCTAAGGCACACGAGCGATTGGAGGACGTTAAGCTGGAGGCGGTGCAAAGTAATAACGTGGAGCTAGTGAGCGAGATCCTGTCGGATATGAACACACTGATCAGTCATGATGAAAGTGCAGCAGAACTCTGTAAGATCCTGAAGGAACCGCACTTCCAGTCCCTGTTAGAAGCTCACGACAAGGTGGCCTCTAAGTCATATGAAGCTCCTCCCACCAGCACCAATTCCACAAGCATGACCAGCTCATCCCTCATGCCGGCTGACACGGTTCGCATGATCAGCATCCAGAAGAAGGCCGGAGAGCCTCTGGGTGTAACATTCCGGGTGGAGGAGGGCGACCTTGTCATCGCGCGTGTTATGCATGGCAGCATGATTGACAGGCAGGGGATGCTGCACACAGGTGATGTCATCCGAGAGGTGAACGGCCGAGAGGTGGGCAAAGACCCCATGGCGTTACAGCACATGCTGAGGGACTGCAATGGAACCATTACACTCAAAATCCTGCCCAGCTACAGGGACACACCTCCACCCGCACAGGTGTATCTGAAGCCACATTTCAACTACAATCCTGACACTGATAACCTGATCCCTTGTAAAGAGGCGGGTTTGGCTTTCTCTAAAGGAGACATTCTGCATATAGTGAACAAGGAGGACACCAACTGGTGGCAAGCATGTAACATAAATGGAGGCCGTACTGGCCTGATCCCCAGTCAGTTTCTTGAGGAAAAGAGGAAGGCGTTTGTTAGGAGAGACCTGGATGGTTCAGGAATCCTCTGTGGGACATTAACTGGAAAAAAGAAGAAAAAGAAAATGATGTACTTAACAGCAAAAAATGCAGAATTTGATCGGCATGAATTACAGATCTATGAGGAAGTAGCAAAGATGCCTCCATTCCAGAGAAAAACTCTTGTGCTGATTGGTGCACAAGGTGTAGGCCGCCGAAGCCTCAAGAACCGTCTGATTGTGTTAAACCCACTGCGATATGGAACTACTGTACCTTTCACTTCCCGGCGTCCTCGGGATGATGAAAAAGACGTCCAGTCGTACTGCTTTGTTTCCCGAGAGGAAATGGAGATGGACATCAAGGCAAGTCGATACCTTGAGCACGGAGAATATGACGGAAATCTGTATGGAACCAAAATTGACTCTATCCATGAAGTCGTTCGCACAGGACGTACTTGCATACTGGACGTCAACCCACAGGAAACGGACCTAAAGAAAACAGTGGACGAAAGCGCCAGGATCAAGCGGGCGTACAATCACTACTTTGATCTGACTATTGTTAATGACAATCTGGACAAGGCCTTTGAGAAACTGCAGGAAGCTGTGGAGCAGCTGGCTACACAACCACAATGGGTCCCTTTGAACTGGGTTTACTGAGACATACAGCCCATCATCATCATCACCATCATCATCACCATCACCACCATCACCATCATCAGCGGCGGCGGCAAAGAACACAAGTTCACATTGAACGGACCCACCAGTCACTATGCAAATGTACACTAGCTATCCAGTCAGGACAGACATAAGGGAAGTGTACTTATTTATTAACATTTTTTATGTTCTACTGACTAAACGTACTTTAAAGAATGTAACTTGGAGGGACAGAAACAAATAGGAATTTTTGAATGACTTGTATGGAAAATTATCATTTTAATGACAGGTATAAGCTGTATTACAGTATTGAAAGCAGGAGTCTGTTTTCTTGCTGTAATTTTAGTGTTACTAACATTGGTTTACAGTGCAGGATTCATCTCGCATCTCTTCATCTTTCTGAACTGTGATGTCATATAGTTCAGTCACTACAGTATGTCAAATAATAGTTTATCCAGCTTCTGACTTGTTAAGACCTTCATTAGGGTCATCCTGTTAGGCTTGATTTTTAGTTAAATTCAAGGAACGAAAGGAGTAAGCCAATTTTAACTTTTTATAAA

Function

symbol description
mpp6 Predicted to be involved in maturation of 5.8S rRNA. Is expressed in organism. Orthologous to human MPHOSPH6 (M-phase phosphoprotein 6).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08570850_08582638.mRNA True 2317 mRNA 0.44 10 8570293 8582907

Neighbor

gene id symbol gene type direction distance location
CI01000016_08421119_08444481 PDE11AL coding downstream 125191 8421097 ~ 8445102 (-)
CI01000016_08385655_08387187 NA coding downstream 182632 8385576 ~ 8387661 (-)
CI01000016_08379971_08382899 CBX3B coding downstream 186257 8379283 ~ 8384036 (-)
CI01000016_08374296_08376159 SNX10B coding downstream 194134 8374250 ~ 8376159 (-)
CI01000016_08232249_08261533 TAX1BP1, TAX1BP1B coding downstream 308760 8231563 ~ 8261533 (-)
CI01000016_08598259_08602660 NPY coding upstream 15324 8598231 ~ 8602660 (-)
CI01000016_08605369_08623062 STK31 coding upstream 22340 8605247 ~ 8623062 (-)
CI01000016_08642218_08643021 NA coding upstream 58534 8641441 ~ 8643021 (-)
CI01000016_08741387_08746007 NA coding upstream 158075 8740982 ~ 8746066 (-)
CI01000016_08769141_08795202 NA coding upstream 185915 8768822 ~ 8795559 (-)
G98603 NA non-coding downstream 17858 8552161 ~ 8552435 (-)
G98602 NA non-coding downstream 21602 8548477 ~ 8548691 (-)
G98600 NA non-coding downstream 22826 8547157 ~ 8547467 (-)
G98559 NA non-coding downstream 109726 8460356 ~ 8460567 (-)
G98558 NA non-coding downstream 110936 8459075 ~ 8459357 (-)
G98607 NA non-coding upstream 25289 8608196 ~ 8608395 (-)
G98608 NA non-coding upstream 25656 8608563 ~ 8608890 (-)
G98612 NA non-coding upstream 33462 8616369 ~ 8616599 (-)
G98613 NA non-coding upstream 34337 8617244 ~ 8617464 (-)
G98615 NA non-coding upstream 37277 8620184 ~ 8620530 (-)
G97341 NA other downstream 2410572 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3152076 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 3239447 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 3646889 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 4639242 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 305926 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 353882 8925960 ~ 8945229 (-)
G98679 NA other upstream 652089 9234996 ~ 9239929 (-)
G98691 NA other upstream 673195 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 926715 9509622 ~ 9512428 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location