CI01000016_08232249_08261533 (TAX1BP1, TAX1BP1B)


Basic Information

Item Value
gene id CI01000016_08232249_08261533
gene name TAX1BP1, TAX1BP1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8231563 ~ 8261533 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08232249_08261533.mRNA
ACACAGCTGCTGATAAACAGATGGCTTTATTCCTGGAGGGGACAGTAGCAAGCAGCGCCATGGAGACATCCAATTTTGCCCATGTCATCTTCCAGAATGTGGGGAAAAGTTACCTCCCTCACGCAGCATTAGAATGCCATTACACCCTCACGCAGTTCATTAAACCAAATCCCAAGGATTGGGTCGGCATATTCAAGCCGTTAAGATGCTCATCTGCTATGTTTTTTGAGAAAGATGTTTTTATGGAGAGCTCATTAGGAAATCAATCTCTTTTTAAACCTGAAGGAAATGTGTTGCGACTCCCTGAACTGATGGGACAAAAGGCAGCGGTGCCAAACACCAGAAAATTGCAAGACCTGTTCCATGAGTCACTTGCCTGGAGCAGCAGGCTGAGTTGTAGCCGCGCTCCCTCAACCGAACATATTCACGAGGGTTTGGTTGGCTGGAGCACCGCTCGTGACTACTACACTTTCCTGTGGTCACCTCTTCCAGACAGCTACACTGAGGGAACCGCAATCAACAGATCTGTGGTCTTTCAAGGTAAAATAACATTGTCAAAAATGGGGTTTTATGCAACCATTTCTTCGATGAATGTCGTGCCAGAGAGATGGCCCCTCAAAGGTTACTATGTGCCAAATGATGATGGCGAGTTCTACCAGTTCTGCTATGTGACACATAAGGGAGAGATCCGCGGGGCCAGCACTCCATTCCAGTTCCGTGCCAACAGCCCCACAGAGGAGGAACTGCTGACAGTGGAGGATGAAGGAGGATCCGATATTCTGGTGGTCACCACTAAGGCCAGTTACCTGGAGCAAAAGATGGAACAAATTCGACAGGAAAAAAAGGAGCTTTTGGAAAACCTGGACCAATTTCAGAAAGAGAGAGATGAACTGATTGATGAGAAGAACAGACTACAGAAAGAATATGAGCAGGAGCGAGAGAGCAGCGCTCAGCTCAGGAAAGATGTGCAGGAGTTGCAGTTGTCTGCCCAGAGCTTGCAGGAGGAGAGAGAGGAGGTGAAAAGGAGAATGGAGGAGAGTACAGCACGACTGTTGCAGTTGGAGGAGGATCTGATCGGAGTCACCCAGAAAGGCCTGCAGAAGGAGACTGAACTAGACTGCCTGAAGGATCGAGTGAAGAAGCTGACCCAGGAGAAAGAGGCTCTTGAGTGTCAGCTGAAGAATGAGAAAGATGAGAAGGAGCTCTATAAGATTCACCTGAAGAATCGGGAGCTTGAGAACACTAAGCTAAGTGCTGAGCTGCAGATGCTGAAATCAGTGGATGTGAATAAGGAGAACACCATTGCTCAGCTGAAGGAGGAACTCACTAGAGTCAAATCCTGCCTGGCAGAGAAAGAAAAACAGCACCGCCAGCTACTGGCCAACAGTTCACCCTCGGGGGAAAGTAAGGCTCTTAGGGAGCAGCTCAGGCAGAAAGAGGAGCAGTTGCAGGCTACCCAGCAGCAGGCAAACATGCTAAAAGCTGAGCTGCGTGACTCCTCCAATGCCCGTGACAGAAGCATGGCCGACCTGTACCGTATCCGCCTGGAGGCCGAGTCATTTAAGAAGGGACAGACGGAGGCCTTGGCTGAGTGCAGCCGCCTGGAAAAGCAGCTGGAGGAGATGAAAAACTCAACCCAGCAGGAGGCGTATAAGGAGACAGAAGGGTTAGCTGTTGTTGAACTGCAGAGAGAAGTTGAAGATTTACGGCTCAGGCTGCAGATGGCTGCTGAACACTATAAAGACAAATATAAGGAATGCCAGAAGTTCCAGAAACAAGTGGCCAAGCTCACTGAACAGCAAGGAGTGAAGAGAAGCCCAGGGTCTGAACCAGCAGCTGGTCCTTTGTCTGCCAGTCCAGAGGCATCTGCACCAGGAAGCCCAGGTACTTCAGATTCTGTGCTAGATGCCATCATTCAGGGCAGGCTGAAAAGTGCAAGCAAGGAGCCAGACAAAAATGACAAATACAGGAAATGCAAGCAGATGCTTAGTGAGGAGAGAGAGCGGTGCAGCATGATAACCGATGAACTCACAAAAATGGAGGTGAAGCTAAAGGAGCAAATGAAAACCAACGAGGGCCTGCGAATGCAGCTGGCTGCTGAGGAGGATCGCTACAAGAGCCAGGTGGCAGAGAAGGGCCGAGAACTCAAGGAGCTGAAGGACAGCCTTTTTGCGTTGACCAAAGAAAAAGAGAAACTGGAGGGGGAGTTGCAAAGGAGTGTCAGCAGGGAAGAAGAACAGGGAAAGAAGAGTGGCAATCTGGATGTGCAGTCAGTTTTCTTGCAGTACCCAATGCCGTACCCTCAAGACGACCCATCTCCCCTGCTGGTGCCCCAGCGCCCCACTGATCTGATGTTTGGGAACCCATACTCTTCTACTGATTCCAGGGATGGAGCCGATGGAGAGTTCTCTGATGACCAGATGCCCCGACTGCCCCCAGTTGGGCCTCCATCCTGGGACAGCAATGTGGTGTGCATACAGCCCGCCCGTAACCTCAGTCGCCCTGATGGACTGGAGGAACCAGAGGAGCCGCAGAGCACTCAAACTAATGATCAGCCTACAGCCACTGACCCTGCAGAATTCCTCAATGATGGACAGATACCGTTCTGCTTTGAACCCAGTGGAGAGCAGAAGCGCTGTCCGCTGTGTGAAGTGATCTTCCCTCCTCATTACGACCAGTCGAAGTTTGAGGAGCACGTGGAGAGCCACTGGAAGATCTGCCCCATGTGCAGCGAACAGTTCCCTCTCGACTGCGACCAGCAGCTTTTCGAGAAGCATGTCCTCACCCACTTCGACAGTAACGTGCTCAACTTCTAGTCGAGCAAAAGGATACTTGCCTCCACATCACATTCACATTTGTGTTACAGTTAACAGCCACTTTAAACAGCATGTTTATCTTTGAGCATTCATCTGTAGAGAACTGATTCTTTATTTAAACACAGTCAAGGTGAAGTTTGGATACTGTTAATGAGTTCCAAATGACTGAAAGAAGGAATTGGTTGCGTTTTAGGGTCTTTTATTTATGTGCGTTTTAGTTGGGGATTAATCCTGTCTATAGGACTGTACTGTTTATTATAGCTCACTTTAACACCTCTCATATCAAGTTAGCAGGGCAGGTGGTGAAGAATACTTTAAGAACACTGAGCAAATGTCATATTAATGCATTCTGTTGAGAACCGTCCCCAGGTTCCATAGGTTAAGTCAGGTATCACCTACAGCTTTTTCTGTCAGGGCATATACGTGACCAGCTAAGAGGGTGATTCTATATTATAAAATTATTTTAGAAGAAGCTTTTAAAGATAAACCTTGATAATCAAGTTATTTGAGTTAGTGTTTTTTTCCTTTATCTATTTAAATCACTTATTTTAATTGAGTTGCATGCTCACATTTCCTGTGCACTGAAATCACAAACCTTTTTTCGTTGTTGTTCCATTTCTTTAGTTAAATACATTCGGTCTCTTACTGTGTGAGTGTGTCTTACTTACTTGATCTAAACGAATAAA

Function

symbol description
tax1bp1b Predicted to enable metal ion binding activity. Predicted to act upstream of or within apoptotic process. Is expressed in mesenchyme pectoral fin. Orthologous to human TAX1BP1 (Tax1 binding protein 1).
tax1bp1 Predicted to enable kinase binding activity. Predicted to be involved in negative regulation of NF-kappaB transcription factor activity and negative regulation of apoptotic process. Located in extracellular exosome.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08232249_08261533.mRNA True 3502 mRNA 0.48 20 8231563 8261533

Neighbor

gene id symbol gene type direction distance location
CI01000016_08229709_08230108 NA coding downstream 1455 8229460 ~ 8230108 (-)
CI01000016_08111153_08185623 CREB5 coding downstream 45940 8111153 ~ 8185623 (-)
CI01000016_08042288_08066945 CHN2 coding downstream 164358 8040556 ~ 8067205 (-)
CI01000016_08039526_08039834 NA coding downstream 191729 8039484 ~ 8039834 (-)
CI01000016_08022369_08033689 PLEKHA8 coding downstream 197874 8020930 ~ 8033689 (-)
CI01000016_08374296_08376159 SNX10B coding upstream 112717 8374250 ~ 8376159 (-)
CI01000016_08379971_08382899 CBX3B coding upstream 117750 8379283 ~ 8384036 (-)
CI01000016_08385655_08387187 NA coding upstream 124043 8385576 ~ 8387661 (-)
CI01000016_08421119_08444481 PDE11AL coding upstream 159564 8421097 ~ 8445102 (-)
CI01000016_08570850_08582638 MPP6, MPP6A coding upstream 308760 8570293 ~ 8582907 (-)
G98472 NA non-coding downstream 28207 8203132 ~ 8203356 (-)
G98471 NA non-coding downstream 28521 8202764 ~ 8203042 (-)
G98090 NA non-coding downstream 35805 8195480 ~ 8195758 (-)
G98032 NA non-coding downstream 130888 8099715 ~ 8100675 (-)
G98034 NA non-coding downstream 137533 8092799 ~ 8094030 (-)
G98493 NA non-coding upstream 15523 8277056 ~ 8280025 (-)
G98506 NA non-coding upstream 18601 8280134 ~ 8280395 (-)
G98501 NA non-coding upstream 31584 8293117 ~ 8295421 (-)
G98511 NA non-coding upstream 43021 8304554 ~ 8306582 (-)
G98512 NA non-coding upstream 60622 8322155 ~ 8322376 (-)
G97341 NA other downstream 2071842 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 2813346 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 2900717 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 3308159 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 4300512 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 627300 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 675256 8925960 ~ 8945229 (-)
G98679 NA other upstream 973463 9234996 ~ 9239929 (-)
G98691 NA other upstream 994569 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 1248089 9509622 ~ 9512428 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location