CI01000016_11938043_11946368


Basic Information

Item Value
gene id CI01000016_11938043_11946368
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11937447 ~ 11946561 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11938043_11946368.mRNA
ACAAATCTCTCAGGCTGCAGTTCACGTCCATGTGCATGTTGCTCTTAAAGGGATACCGGCCCGTTTACAAGTCTTCTGGAATGATCAGAATCAGTGAATTGGGATATTATTTACTCATTCCTCGTGTCTCATCAGATATATTTTTACTGCTTTCGCATTTGAGACCTGACGTCGTCTGTTTACTGATTTCACAATGGAAGAGCAGTACAAGAATGGCACAGTTGGTTTCATGCAGTCCACAGAATCTCCTTCCTCTCAACCATCACAGGATTCACTAAGCTCCAACAACAGTTTCTTGTTCAGTGACGATGAGACGAATGTTTACCTGTTGGAGGACAGGGACAGGCCACATGAAGCCCATTTGACTCAGTCCACTCTCTTTAACAGAAGTGTTTACAGTATGAATGGGGAGCAGGAGCGTCCTGGATCTCAGTGGGCGTGTGATGGATTCAGTGACCGTGAGAGGTCACAGGGCAACAGTCACGCTGGGTCAACGTCTTCGTCCATCTCATCATTTCTCTCCCTCTCCTCGTCTTCATCTGGATTAGGATGCAGCATCTCTGAGAGTGAGCGAGGAAAGAATGGAAGAACTGAAGGAGACCTGCTGTTTGCTCGTAAGTGTTTAGAGCTCCAGGGGTTTGTTCGGCCTCTGCTGGAGCTTCTAAACGGACTGAAGAAAGGAAGATTTGACAAAGGTCTGAGCAGTTTTCAGCAGAGTGTTGCAATGGACAGAATTCAGAGGATTGTGGGAGTGCTGCAGAAACCACATATTGGAGAGAAGTACTTGCCTACTTTGCTCCAGATAGAGGTGATGCTAAAGCTTTGGTTCCCTCAAGTGACTGCTCACGTTTCTGTTACACCTAACCCTGCTGACTTTTCACCTCAAAACATTTCCACCCATGGCAAAAGCAATATCACTCCCCCACACAAGCACAAAGACCAATTACATATTCCAGTCAAGAAGCGAAGATTGAGCTGGTCAGACACAGACTCATCCTCCTCTTCTCCTCCTGTGGTGTGTAAGCGCACCAAATGTTGTGAAGAGCAACATCAGTGGCCATATGTTGATGGAGGGGAAGGCTCTTCAGGGACCCCTTCCCTTTCCTCACACACGAACCAATCAGACAAGAGAGTTAGTGAAACCCTGGAGCACAAGGTCATCCGGTGGTCAGGTTCAAGACTGACATGGGTGCACATTGCTCCCATCTTCTCCCCACCTAAATCTGGTCCCTTTCATAAAGGCGGAATGGCTAATGATAGAGGGAGTGGCAGTGTCCTCCTTCCAGTTTCCCCTCTCACCAGCAGGAGCAGTCCAGTCACGCAGGACAGCTTAATCTCCTCCACCACACCTTTTTCAGAGCCAGCTGGATGCCAATGCCAGTCTGTAAGTTTAGGGACAACAAGTCCATTGCAGGAGCACACCCAGAAACCCATCCCACAAATCACAATGAAGCCTTCAACCCTAGAACAGCAAAGCCCTTTACAGTCCTGATGCAGAGAAACCAAGCACAACCAGCCGAAAGTCTTCTCTGTGTCAGAGAAGAATTGAAGTATGGAATGTTAAAAGGGTTGTCTATTACAGTGATTGAAAAAGTATATCTAAAGAATCTTGAAGAAGTTTAAACTCAACATGTAAGACTTTTTAAAATTGATTGGGTAAAAAAATTGGCTGTTTTTGAACTGGAGAGTACCTAAATTAAAGGTGAAGTGTGTGGGTTTGGTGCCACTGCCATCACCAAATGGAATTGCAAAAACAATTATTTCAAACAAGTTTTGAAACATTCCACTATCTGGCATTGGTCAGCCAAACAGATTGCCCTGCCCAAAAATCAAGGCATTGGTTGAGCCAGTGTTTGCATGACAGTATTCTAACGTCCAAAAAGTCACCTTTTAGGAAATTTGATATCATGCAAATTGCCTTCAAGAGTGTGTGTTTAAATATGAGGGAAAGTATAATTATTGACTTTGTTTTATTCCCAAAATAAGGACAAATTAAGACTAGAGAGCAATAATTTTAATGAAAGGATAACACAAGGTCAAGTCAGCGGTATGACTTAATATACCATCAGTTAGATGGCATAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11938043_11946368.mRNA True 2088 mRNA 0.44 6 11937447 11946561

Neighbor

gene id symbol gene type direction distance location
CI01000016_11908468_11923802 PRPF3 coding downstream 11682 11907727 ~ 11925765 (-)
CI01000016_11876020_11896223 ICE1 coding downstream 41224 11875492 ~ 11896223 (-)
CI01000016_11866962_11874982 PAPD7 coding downstream 62465 11865984 ~ 11874982 (-)
CI01000016_11670870_11794943 ADCY2A coding downstream 142364 11670818 ~ 11795083 (-)
CI01000016_11353238_11464979 TRIO, TRIOB coding downstream 472468 11352733 ~ 11464979 (-)
CI01000016_12116368_12123187 NA coding upstream 169741 12116302 ~ 12123298 (-)
CI01000016_12137876_12146233 NA coding upstream 191213 12137774 ~ 12147884 (-)
G100670 NA non-coding downstream 36102 11901106 ~ 11901345 (-)
G100669 NA non-coding downstream 36586 11900642 ~ 11900861 (-)
G100490 NA non-coding downstream 123345 11748189 ~ 11814102 (-)
G100488 NA non-coding downstream 151891 11762108 ~ 11785556 (-)
G100625 NA non-coding downstream 307289 11629855 ~ 11630158 (-)
G100679 NA non-coding upstream 660 11947221 ~ 11947828 (-)
G100701 NA non-coding upstream 35515 11982076 ~ 11982307 (-)
G100712 NA non-coding upstream 53139 11999700 ~ 12000027 (-)
G100722 NA non-coding upstream 214194 12160755 ~ 12161232 (-)
G100190 NA other downstream 1885058 10051168 ~ 10052389 (-)
G99178 NA other downstream 2122492 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 2425019 9509622 ~ 9512428 (-)
G98691 NA other downstream 2679836 9256102 ~ 9257611 (-)
G98679 NA other downstream 2697518 9234996 ~ 9239929 (-)

Expression


Co-expression Network