G99398


Basic Information

Item Value
gene id G99398
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10223246 ~ 10223455 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113110
GGCAGAGGAAATGCTAGTGATGACAGACATCCTGTGTTTGTAAGACAGTGATGAGAGCAATTAGGAGCTTCAGCTGTTCAAGACTGGCTTCAAATTAAATATAGATGAATTAGGAGAACATGATTAAAGAAAATGACCGGTTATATTCCGAAGATGTACATACAAAAGGAATAATGAGATCAGTTTCAAGATCCAGGCTTCTTATGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113110 True 210 lncRNA 0.37 1 10223246 10223455

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 170879 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 222525 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 267918 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 320364 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 337013 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 110422 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 111803 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 197120 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 285009 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 363744 10587199 ~ 10588775 (+)
G99397 NA non-coding upstream 73 10222936 ~ 10223173 (+)
G99395 NA non-coding upstream 993 10221304 ~ 10222253 (+)
G99394 NA non-coding upstream 5712 10217316 ~ 10217534 (+)
G99393 NA non-coding upstream 5989 10217023 ~ 10217257 (+)
G99392 NA non-coding upstream 6261 10216734 ~ 10216985 (+)
G99399 NA non-coding downstream 429 10223884 ~ 10224151 (+)
G99402 NA non-coding downstream 3867 10227322 ~ 10227547 (+)
G99403 NA non-coding downstream 4305 10227760 ~ 10227967 (+)
G99406 NA non-coding downstream 7659 10231114 ~ 10231370 (+)
G99408 NA non-coding downstream 8587 10232042 ~ 10232308 (+)
G99041 NA other upstream 297592 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 426306 9795950 ~ 9842576 (+)
G98288 NA other upstream 1220529 8996098 ~ 9002717 (+)
G97824 NA other upstream 2207471 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2437523 7783987 ~ 7784996 (+)
G99410 NA other downstream 10945 10234400 ~ 10236851 (+)
G99456 NA other downstream 70936 10294391 ~ 10298904 (+)
G99940 NA other downstream 1448190 11671645 ~ 11672873 (+)
G100178 NA other downstream 1937186 12160641 ~ 12162845 (+)

Expression


Co-expression Network