CI01000018_04118240_04160401 (VIPR1B, VIPR1)


Basic Information

Item Value
gene id CI01000018_04118240_04160401
gene name VIPR1B, VIPR1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4117987 ~ 4160401 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04118240_04160401.mRNA
GCTGCAAAGGAATGTGGGATATTATTGCTTGCTGGCCATCAGCCAAAGTTGGGGAACATGTGGTTATCCCTTGTCCAAATTACTTCAGACACTTCTCTGATCATCATGAGGGTAACCTCTCAAAGACTTGCACTGCTGATGGCTGGACTGAGATGGACCCGATGGAAATCGCAGTGTATTGTGGCTATAATCTGAATGGTACCGTTGACGATGATAGTTTCTTCAGGTCGGTAAAGATTGGCTACACCATTGGACACAGTGTTTCTCTCATTTCGCTTACTACTGCCATTGTAATACTTTGTATATTCAGGAAACTCCACTGCACGCGGAACTACATCCACATGCACCTGTTCGTGTCCTTCATTTTGAAAGCCATTGCTGTCTTCGTCAAAGATGCGGTGCTGTATGATGTTGTTCAAGAGTCTGACAACTGCTCCACTGGCTCTGTTGGCTGCAAAGCTGTGATTGTCTTTTTCCAGTATTGCATTATGGCAAGCTTCTTCTGGCTTCTAGTGGAAGGTCTGTATCTTCATGCTCTGTTGGCCGTCTCTTTCTTCTCAGAGAGGAAGTACTTCTGGTGGTACATTCTGATTGGTTGGGGAGGCCCGATGATTTTCATCATGGCTTGGAGCTTTGCCAAGGCTTACTTCAATGATGTGGGATGTTGGGATATAATTGAAAATTCTGACTCATTCTGGTGGATTATCAAAACCCCGATATTAGCTTCAATTCTGATGAACTTTATCCTGTTCATTTGTATCATTCGGATACTGAGGCAGAAGATCAACTGTCCTGACATTGGGAGAAATGAATCAAACCAATATTCGAGGCTGGCAAAATCCACACTTTTGTTGATTCCACTCTTTGGGATAAACTTCATCATATTCGCTTTCATTCCTGAGAACATAAAAACTGAGCTAAGGCTTGTGTTTGACCTCATTCTTGGGTCATTTCAGGGTTTTGTGGTAGCTGTACTCTACTGTTTTCTGAATGGAGAGGTCCAAGCTGAAATCAAGAGGAAATGGAGACGATGGCACCTTGAAAGATTTCTGGGTCCCGACACCAAATACCAGCACCCATCCATGGGCAGCAACGGCAACAACTTCAGCACGCAGATCTCCATGCTAACTCGCCGCGCCTCTGCGTGTCAGGATGAAACATCCATCACGATCTAAGCTAGCATCTACAATGACGTGGTATTGTCACACCAGAGACTGTGAGAAGCCATGACGATGTTCCGGTAGTGTTCTACTGAAATAGTTCTGAATTTCAGTTACTACATATAATTCTTTGGAGGTATGAGCTACTAAACCTTACATTTTTGCTGAATATAGCGCAATTTGATGCCATAGAAGTCACTGACGAGGTTCTTATTTGAAAAACTCAATATCAGATCACCTTCTACAACACATAAAACCTGTAAATAAA

Function

symbol description
vipr1b Predicted to enable G protein-coupled peptide receptor activity; peptide hormone binding activity; and vasoactive intestinal polypeptide receptor activity. Acts upstream of or within adenylate cyclase-modulating G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including eye; gut; heart; integument; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in achalasia. Orthologous to human VIPR1 (vasoactive intestinal peptide receptor 1).
vipr1 Enables peptide hormone binding activity and vasoactive intestinal polypeptide receptor activity. Involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger. Part of receptor complex. Implicated in achalasia. Biomarker of Crohn's disease and ulcerative colitis.

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04589 VIPR1; vasoactive intestinal peptide receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04118240_04160401.mRNA True 1428 mRNA 0.43 11 4117987 4160401

Neighbor

gene id symbol gene type direction distance location
CI01000018_04075425_04081550 NKTR coding downstream 36437 4075405 ~ 4081550 (-)
CI01000018_04041639_04049792 NA coding downstream 68195 4040830 ~ 4049792 (-)
CI01000018_03991163_03994220 NA coding downstream 123749 3990550 ~ 3994238 (-)
CI01000018_03965992_03984331 NA coding downstream 132468 3965939 ~ 3985519 (-)
CI01000018_03942344_03955439 VILL coding downstream 162548 3942087 ~ 3955439 (-)
CI01000018_04221457_04229417 NA coding upstream 60835 4221236 ~ 4229417 (-)
CI01000018_04231186_04233076 NA coding upstream 70518 4230919 ~ 4233076 (-)
CI01000018_04239141_04241413 CCDC58 coding upstream 77852 4238253 ~ 4241413 (-)
CI01000018_04248388_04258010 KPNA1 coding upstream 87721 4248122 ~ 4258038 (-)
CI01000018_04307560_04321214 QTRTD1, QTRT2 coding upstream 146520 4306921 ~ 4322286 (-)
G105148 NA non-coding downstream 17830 4099921 ~ 4100157 (-)
G105146 NA non-coding downstream 21422 4096332 ~ 4096565 (-)
G105141 NA non-coding downstream 25647 4089390 ~ 4092340 (-)
G105142 NA non-coding downstream 30633 4087144 ~ 4087354 (-)
G105140 NA non-coding downstream 31198 4086526 ~ 4086789 (-)
G105259 NA non-coding upstream 46504 4206905 ~ 4207137 (-)
G105261 NA non-coding upstream 50496 4210897 ~ 4211258 (-)
G105263 NA non-coding upstream 58277 4218678 ~ 4218909 (-)
G105185 NA non-coding upstream 74204 4234605 ~ 4238135 (-)
G105277 NA non-coding upstream 125338 4285739 ~ 4285992 (-)
G105104 NA other downstream 100170 4007697 ~ 4017817 (-)
G104968 NA other downstream 617473 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 1717084 2389201 ~ 2488018 (-)
G103842 NA other downstream 2157929 1959497 ~ 1960058 (-)
G105200 NA other upstream 83066 4243467 ~ 4246010 (-)
CI01000018_04856240_04875704 DAP other upstream 694680 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1730935 6020861 ~ 6025876 (-)
G106538 NA other upstream 2370046 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 2480211 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023410 vipr1b coding NC_007135.7 CM002908.2 20708174 ~ 20808283 (-)