CI01000018_06086167_06089014 (EIF1AX)


Basic Information

Item Value
gene id CI01000018_06086167_06089014
gene name EIF1AX
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6086072 ~ 6089014 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_06086167_06089014.mRNA
ATGCCGAAAAACAAAGGTAAAGGAGGAAAAAATCGGCGGCGTGGTAAGAATGAGAATGAATCTGAGAAAAGGGAGCTGGTGTTTAAAGAGGATGGACAAGAATATGCTCAGGTCATCAAGATGTTGGGAAATGGGAGATTGGAGGCCATGTGTTTTGATGGAGTCAAACGGCTTTGTCACATCCGAGGAAAGCTCCGGAAAAAGGATAACAAAGCAGATGTCATTTTGAAGTATAATGCTGATGAAGCTCGGAGTCTGAAAGCCTACGGAGAGCTTCCAGAACACGTCTGTATCCTAATAGACATTCAAACATTCTGTAAGGAACTGGCCCTTTTCAAAAAAGCATGTTGGTTATAATTTGTTATTTTACGTGTATTGTTTTGATGAGCTTACAATGGTTGCTTTTTGTCCTCTGCTGCTTTTGATCAGAAAACCCGTGATTTTGAAATAAA

Function

symbol description
eif1ax Enables RNA binding activity. Predicted to be involved in translational initiation. Predicted to be located in cytosol. Predicted to be active in cytoplasm.

GO: NA

KEGG:

id description
K03236 EIF1A; translation initiation factor 1A

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_06086167_06089014.mRNA True 452 mRNA 0.40 6 6086072 6089014

Neighbor

gene id symbol gene type direction distance location
CI01000018_06066391_06085051 NA coding downstream 1021 6066391 ~ 6085051 (-)
CI01000018_06057137_06059021 NA coding downstream 26997 6056886 ~ 6059075 (-)
CI01000018_06052815_06056229 NA coding downstream 29718 6052711 ~ 6056354 (-)
CI01000018_06027217_06038423 NA coding downstream 47649 6026991 ~ 6038423 (-)
CI01000018_06021105_06025859 NA coding downstream 60213 6020861 ~ 6025876 (-)
CI01000018_06095005_06111764 RPS6KA3, RPS6KA3A, RPS6KA3B coding upstream 5817 6094831 ~ 6111764 (-)
CI01000018_06132642_06141654 PDHA1, PDHA1A, PDHA1B, PDHA1.L coding upstream 43197 6132211 ~ 6141654 (-)
CI01000018_06353801_06362659 ARMC1 coding upstream 264708 6353722 ~ 6364041 (-)
CI01000018_06370452_06384112 PDE7A coding upstream 281104 6370118 ~ 6384766 (-)
CI01000018_06425724_06426234 CRH, CRHB coding upstream 336332 6425346 ~ 6426234 (-)
G106077 NA non-coding downstream 42682 6043160 ~ 6043390 (-)
G106017 NA non-coding downstream 238513 5847345 ~ 5847559 (-)
G106013 NA non-coding downstream 286686 5799157 ~ 5799386 (-)
G105956 NA non-coding downstream 364223 5721518 ~ 5721849 (-)
G105948 NA non-coding downstream 388962 5696758 ~ 5697110 (-)
G106096 NA non-coding upstream 86418 6175432 ~ 6175649 (-)
G106477 NA non-coding upstream 163785 6252799 ~ 6253046 (-)
G106479 NA non-coding upstream 179453 6268467 ~ 6268704 (-)
G106498 NA non-coding upstream 291739 6380753 ~ 6383489 (-)
G106484 NA non-coding upstream 382514 6471528 ~ 6474425 (-)
CI01000018_04856240_04875704 DAP other downstream 1210233 4855081 ~ 4876532 (-)
G105200 NA other downstream 1840062 4243467 ~ 4246010 (-)
G105104 NA other downstream 2068255 4007697 ~ 4017817 (-)
G104968 NA other downstream 2585558 3482104 ~ 3500514 (-)
G106538 NA other upstream 441433 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 551598 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023463 eif1axb coding NC_007135.7 CM002908.2 24164227 ~ 24168533 (-)