CI01000018_06425724_06426234 (CRH, CRHB)


Basic Information

Item Value
gene id CI01000018_06425724_06426234
gene name CRH, CRHB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6425346 ~ 6426234 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_06425724_06426234.mRNA
ATTCTCCTCGCCACTTTTTGACATGAAGCTCAATTTTCTCGTCACCACCGTGGCTCTGCTCGTTGCCTTTCCACCACCGTATGAATGTAGAGCCATCGAAAGCAGCTCCAACCAGCCAGCCACGGACCCCGATGGAGAGCGACAATCCCCGCCGGTTTTGGCACGCTTAGGGGAGGAGTACTTCATCCGGCTCGGTAACAGAAACCAGAATTCTCTCCGATCCCCAGCCGACAGCTTCTCCGAGACATCCCAGTATTCCAAAAGAGCACTGCAGCTTCAGTTAACGCAGCGTCTGTTGGAGGGGAAAGTTGGAAACATCGGCCGCTTGGATGGCAATTACGCGCTCCGGGCGCTCGACTCAATGGAGAGAGAGCGCAGGTCGGAGGAGCCACCGATTTCCCTGGACCTGACCTTTCATCTGCTACGAGAAGTACTGGAGATGGCCAGAGCCGAACAAATGGCCCAGCAAGCTCACAGCAACCGCAAAATGATGGAAATATTCGGGAAGTAACCATGAGCAAACCCATCAGCCAAAGATATTTTTACATTTAGCACAAACATGAATATTCTGTACCATAGTGCTGCTTTTCCATCATGATCTATTTATACCGGTGACTTATTTATTTGTAGATATTTCAATGAAGGCGAATAGAGTACAGTAGGTGTATATGAATCAAAGTGTTCAGAAGCGCAAAACTGTCATCACTCTCCATCAATGTTATTGTATAAGTGATCATTCAAAATTGTAGATGAAGAAAACGTTTGGGTTTCTTTAAAACAAAAAAAAAACAACAAAAAAAAAACAATATTTTCCAGTACTGCATTATTTTATCTGACAGACTTGAGTTTCATTGTAACATACAGTACATTGTTTAAGTTTGTTAATAAA

Function

symbol description
crhb Predicted to enable hormone activity. Acts upstream of or within several processes, including melanosome localization; regulation of hematopoietic stem cell differentiation; and response to immobilization stress. Predicted to be located in extracellular region. Is expressed in several structures, including brain; eye; gill; post-vent region; and testis. Human ortholog(s) of this gene implicated in obesity and panic disorder. Orthologous to human CRH (corticotropin releasing hormone).
crh Predicted to enable corticotropin-releasing hormone activity. Involved in several processes, including dopaminergic synaptic transmission; positive regulation of hormone secretion; and regulation of NMDA receptor activity. Located in extracellular space. Implicated in obesity and panic disorder. Biomarker of Alzheimer's disease and Parkinson's disease.

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05256 CRH; corticotropin-releasing hormone

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_06425724_06426234.mRNA True 889 mRNA 0.44 1 6425346 6426234

Neighbor

gene id symbol gene type direction distance location
CI01000018_06370452_06384112 PDE7A coding downstream 40580 6370118 ~ 6384766 (-)
CI01000018_06353801_06362659 ARMC1 coding downstream 61305 6353722 ~ 6364041 (-)
CI01000018_06132642_06141654 PDHA1, PDHA1A, PDHA1B, PDHA1.L coding downstream 283692 6132211 ~ 6141654 (-)
CI01000018_06095005_06111764 RPS6KA3, RPS6KA3A, RPS6KA3B coding downstream 313582 6094831 ~ 6111764 (-)
CI01000018_06086167_06089014 EIF1AX coding downstream 336332 6086072 ~ 6089014 (-)
CI01000018_06475800_06482278 PDK3, PDK3A coding upstream 49075 6475309 ~ 6482291 (-)
CI01000018_06484577_06490112 SLC51A coding upstream 58343 6484577 ~ 6490112 (-)
CI01000018_06493607_06502730 ZDHHC20 coding upstream 67111 6493345 ~ 6502730 (-)
CI01000018_06503908_06515370 NUP58 coding upstream 77548 6503782 ~ 6515370 (-)
CI01000018_06547019_06585316 PHLDB2 coding upstream 120152 6545849 ~ 6585316 (-)
G106498 NA non-coding downstream 41857 6380753 ~ 6383489 (-)
G106479 NA non-coding downstream 156642 6268467 ~ 6268704 (-)
G106477 NA non-coding downstream 172300 6252799 ~ 6253046 (-)
G106096 NA non-coding downstream 249697 6175432 ~ 6175649 (-)
G106077 NA non-coding downstream 381956 6043160 ~ 6043390 (-)
G106484 NA non-coding upstream 45294 6471528 ~ 6474425 (-)
G106495 NA non-coding upstream 65006 6491240 ~ 6491763 (-)
G106539 NA non-coding upstream 110109 6536343 ~ 6536648 (-)
G106541 NA non-coding upstream 111649 6537883 ~ 6538167 (-)
G106543 NA non-coding upstream 114202 6540436 ~ 6540674 (-)
CI01000018_06021105_06025859 NA other downstream 399470 6020861 ~ 6025876 (-)
CI01000018_04856240_04875704 DAP other downstream 1549507 4855081 ~ 4876532 (-)
G105200 NA other downstream 2179336 4243467 ~ 4246010 (-)
G105104 NA other downstream 2407529 4007697 ~ 4017817 (-)
G104968 NA other downstream 2924832 3482104 ~ 3500514 (-)
G106538 NA other upstream 104213 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 214378 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location