Gene
RNA
| Item | Value |
|---|---|
| gene id | G106539 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 6536343 ~ 6536648 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU121115 | True | 306 | lncRNA | 0.34 | 1 | 6536343 | 6536648 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_06503908_06515370 | NUP58 | coding | downstream | 20973 | 6503782 ~ 6515370 (-) |
| CI01000018_06493607_06502730 | ZDHHC20 | coding | downstream | 33613 | 6493345 ~ 6502730 (-) |
| CI01000018_06484577_06490112 | SLC51A | coding | downstream | 46231 | 6484577 ~ 6490112 (-) |
| CI01000018_06475800_06482278 | PDK3, PDK3A | coding | downstream | 54052 | 6475309 ~ 6482291 (-) |
| CI01000018_06425724_06426234 | CRH, CRHB | coding | downstream | 110109 | 6425346 ~ 6426234 (-) |
| CI01000018_06547019_06585316 | PHLDB2 | coding | upstream | 9738 | 6545849 ~ 6585316 (-) |
| CI01000018_06598234_06605351 | PLCXD2 | coding | upstream | 61333 | 6597981 ~ 6605934 (-) |
| CI01000018_06639339_06649926 | NA | coding | upstream | 102559 | 6639207 ~ 6649971 (-) |
| CI01000018_06665847_06684600 | NA | coding | upstream | 129139 | 6665787 ~ 6684600 (-) |
| CI01000018_06696391_06705674 | PTCHD1 | coding | upstream | 159110 | 6695758 ~ 6705674 (-) |
| G106495 | NA | non-coding | downstream | 44580 | 6491240 ~ 6491763 (-) |
| G106484 | NA | non-coding | downstream | 61918 | 6471528 ~ 6474425 (-) |
| G106498 | NA | non-coding | downstream | 152854 | 6380753 ~ 6383489 (-) |
| G106479 | NA | non-coding | downstream | 267639 | 6268467 ~ 6268704 (-) |
| G106477 | NA | non-coding | downstream | 283297 | 6252799 ~ 6253046 (-) |
| G106541 | NA | non-coding | upstream | 1235 | 6537883 ~ 6538167 (-) |
| G106543 | NA | non-coding | upstream | 3788 | 6540436 ~ 6540674 (-) |
| G106579 | NA | non-coding | upstream | 171136 | 6707784 ~ 6707988 (-) |
| G106581 | NA | non-coding | upstream | 177155 | 6713803 ~ 6714006 (-) |
| G106538 | NA | other | downstream | 2831 | 6530447 ~ 6533512 (-) |
| CI01000018_06021105_06025859 | NA | other | downstream | 510467 | 6020861 ~ 6025876 (-) |
| CI01000018_04856240_04875704 | DAP | other | downstream | 1660504 | 4855081 ~ 4876532 (-) |
| G105200 | NA | other | downstream | 2290333 | 4243467 ~ 4246010 (-) |
| G105104 | NA | other | downstream | 2518526 | 4007697 ~ 4017817 (-) |
