CI01000018_06665847_06684600


Basic Information

Item Value
gene id CI01000018_06665847_06684600
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6665787 ~ 6684600 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_06665847_06684600.mRNA
GATGCTTTACAAGCACAGCAAGCACCTGAGTGGACGATACAAGAAGTCCGCACATCACTTTATCTGGCTCCTCTGTCTTTGGGTTCACCTCCTGCCTCAAGTGGATGGCTTCTTTATGTCTGATGCTAAGGCTGTCCTGCAAGCATGTGATGACCACTGGACTTTACAGGGGCAGTGGCGTATACCTGTGCTCTTTCAAACAACAGTATGCGTGGACGTAAAGGTCCTTTCCCCAGGCGAGTGGACTGCATTTAGCTATGTCTCCGCCCCCGCACCCCGCTATGAGCTGGCCCTGCAAGGGGATCAAAACAACCTGTACGCATGGCTGTTGGGCGTACGCCACCAGTTCACTGTCCAGCTGAACACTCAACGCTGGTACCACATATGTCTACGGTGGGATGCCCCTCAAAAAAGCTTCAGCCTGACAATAGATGGGAGCTCTGAAGTATATCAGCGGACCGCCATTGCCAAAGCAATTCCCCCTTCTGGACGTCTTCTGCTGGGCTGCCAACCAAATGAGGCCTCACTTAAGGTGAAAATGGCCACAGTGGAGCTCTACCTTTTCCGCATATGGGATGATGTAGGAGAGCACAGGGTATGTGAGGACGGGACCGTGATTGGTTGGGACTCGCAACTTTGGGCTTTCACACGACCCCAGGCCAGAGTCCAAGATAACACGCTTCAATGTGGTGAGTACAGGGGATTGACAAGAGGCCTGAGGCATTTGCGTATGAAACGCGATGTACAAGGATCTTCAACCCCATTCAGCACATCCCAAAGTGTAGCCACTAGCCGAGAGTTTGTTCCGACATCTCAAAGTCCACTCTACTCAATTTTGGCTTCAGTATTTACCAGTGCACAGAAAACCACAACCCAAGGACAGGACATTCTAACTTCGAGTCAGGTCTCTGCTTCAACCTCTCAAGCCAGAACCACATCGAATCCTGCAGGACTCGCTACAACAACTTCTAAACCTTCAATGAATCTCACTACACCAACACAAATTCCGCTTACATCAGCAACCACATCAAACACAACCTTTCCACCCGCCACTCAAGCTCTGACTGGTTCAGCTCTTACTAACACGACTACTATGTCAAATACTGGTGGATTAAACACGTCGCCTTCAACACCAGCCTCACCTATGTCTTATGTAACCACTCAAATGACCCAGAGCACGTCAATATCTGCCCAGACACTTTCAAACAATCACATTAGCCATCCAGTCAGTGGCTTTGGTACCTCTGAAACAACAGCCAATCACACGACAGTAAGCTCTTCCACTGAACCAACTGTCATGACTCAAGTAACCAATCAGACAGCAGTTCTACGAACAACGACGTCCAATGCATTATTCACAGAGCCATTTGTGGTACAGTGCAACTTTTCCCAATACTGCGCTAATGAATCATCATACTACTGGATGCTTGTGGAGGTGTATGACTCTAATATGACAGAGAAAGCTATTCAAAGTTGGTTTTCAGAGCTTTTTAACATGAGCATCTGCTCTGCTGAAGATTTAACAACAGATAACAATATTACATCATACCAAAATGACATAGTCTTTGTGCTGAGCCAGCCTGTGAATACATGCATCCTCCGCAATCTGGTGGAAAACTGTATACATATCGACTCATCAATCCAGCTTCTGGGAGATGTAGAAAGAGTGGGAAAAGGCCTGTGCCCAAAGAACAATATTACGCCCCCTGGAGATGGTTTTGTGCACTGCACATCTCCAATGTCTTATGATGGTATCTGCAAGACCCAGGGATCTGTAAATGTCACATGCTATTATAATGAGAATGGCTTTGTTCCTAAAGACTTTGTTGCTAATCAATCCTGCAATGTTGAGAACCAACAACAATGTGAGTGTCATGTATCTAACAACAACGATACCCTGTTCAATACAACACAATCAAATACAACAGCCTTTACAATGAACACAACCTTGTTTAACGCAACAGATATTCCATTGAATGTAACCATCTTCAATGGGACCGATGTCAATCGTAGCATCAACACAACAGAGACTTCCAATAACACAACAGAATTTAACACAACAGAAATTCCATTGAATGTAACCATCTTCAATGGGACCGATGTCAACCGTAGCATCAACACAACAGAGACTTCCAATAACACATCAGAATTTAACACAACCATTAGCCCTGCACTTAATACAACATCATTTGACAACACAACACAGATACATACAACAACAACCTTTCCAACAACAGAAAATATTACTAACTCCACTTCAGAGCCTGTCACAACAGTTAGTCTCCTTAACACAACACAGTCAAATGGCACAACAGAAAAAGACTTTACTGAAAATACAATCAGTAATACAACTACAACATTCAATCCAATTAGTATTCCAAACAACATACCAACAAATACTACCATTATTAGCATTGTCACAAATAGTAGTACAGCTCCCACAACTGCTCTGTCAGCCATACTTCCAAGCTCTCCTCAGAACAGCTCCACTTCCACAACAGCAGCTCCAATTATTGCTCCGACTCCAACGACTAGTAGAAGTAACACAACTGCAGACACCACAAGGCCAGCCATTCCAGCTGTGACAACACCCTCCACTACCATGGCAGCCACTTCAGAAGCAACAACTAAAAGCCCAGACAAAGTGGCTAGCGATCTTCTGAATCAAACACAGAATGTGGCATCTCTAAACTCAACTCAGGTGAATCAGCTGGTCAACCAGCTAGAGAATCTTCTCTCTGCACCCAATATTACTCTGGATCTGGGTCGAACAGTGCTGTCCGTCATCAACAACTTTCTAAACAGCTCTACAAGTGCTCTTGCTGCCTCTAATCGATTAATCAAAGCTGTGGATAATTTGGCTCTAAAACTTGTGATTCGGGACCAGACTGAGAACATTGTATTTGATTCTCTTGCTTTGACTGTGACCAAAGTTGATGGCACCAACTTTGGGGAAACGTCATTCACAATTGCAGATCCCTTGAACCCACAGGTCACAAAAGGATTTCAAAGACAAGTCAGGGCAGCAGAAAGTTCCTCCTCAATGGGCAAAATAACACTACCTGCATCCCTGACAGAGAACCTCTCTCCAGAACAACAGAAGATAGCCTCAAGAGTCCAGTTCACCTTCTTTCAGAAAAGCACATTTTTTCAGGATAAAAGCCTGACTCAACAGATGCTGAACAGCCACATTCTGGGCTCTAGTGTGGCTAACCTGTCAATCAAAAACTTGAGGGAGAATGTTGAGTTTACTCTGAGGAATAAACAGCCCGTTGCGGGGAACTATGTAGCTTCCTGTGTTTTCTGGGATTTTGACCAAAACGGAGGTTCAGGAGGCTGGAATCGCAACGGCTGCTATGTCAAGAACAGCAGCACCGAGAACGAAACCATCTGCAGCTGCAGTCACCTGACCAGCTTTGCTGTGCTGCTGGACATTAGCCGGGAAGGCCAAACTGACCGTCTACAGGCCACCATCCTTACCTTCATCACTTACATTGGATGTGGGGTGTCCGCCATTTTTCTCTCAGTTACTCTGCTCACTTACCTTGCGTTTGACAAACTCCGCCGAGACATTCCTTCGAAGATCTTGATTCATTTGTGTTTTGGCCTGCTGTTCCTAAACCTGGTATTCTTGTTGGACTCATGGCTAGCGTTGTACCCAGATGCAGTAGGCCTGTGCATTTCTACAGCATTCTTCCTGCACTACTTCCTTTTGGTTTCCTTCACCTGGATGGGTCTGGAGGCTCTACATATGTACCTGGCCATCGTCAAGGTCTTCAACAACTACATGTCCAGATACATGCTGAAGTTTTCTCTGGCAGGCTGGGGACTCCCTTTGGTTGTCGTCATTATTGTGATTGCGATAAACAAAGATAACTATGGCCTCATAAGCTATGGGAATATTTCTGATGGACCTACAGAGGATTTTTGTTGGCTGAAGAATGACATAGCATTCTACGTAGCCGTTGTGGCATACTTCTGCATCATATTTTTGTTGAACCTGTCCATGTTTTTGGTGGTGATGGTCCATCTGAGACGAATCAAGCGGCAAAACCCCCACAATAATCAGTACCGCAGCAGCTTGCATGACCTTCGTAGCATCGCGGGACTCACTTTCCTGCTGGGGCTCACATGGGGCTTCGCCTTCTTCGCCTGGGGACCCGTCAAGTTGGCCTTCATGTACCTGTTTTCCATCTTCAATTCTCTACAGGGATTTTTTATTTTTGTTTTCCACTGCGCTCTGAAGGAAAATGTCCGTAAACAGTGGAGAATGTACCTCTGCTGTGGCAGGTTACGATTAGCTGAAAATTCAGAGTGGAGTCGGACAGCCACACAGAGCAACAACAAGAAGAATTCGATTCTGACAGCAAATACGTCTGATTCAGTGACCCACAGTGCACCGCGAAGCTCAGTGAGCAGCGATGAATCTGTGCCATCCCATGGCATCGGCTCACCAATGGACGACAGTCTGATCATGTCAGGGGAAGAGAACGACGATGTGGTCCTCAACGAGATCAACAGTCAACTCAGTTCACGACACAGATCTGTGTAGATTTTTGGAAGAGGATTATAAACCCAGACAGGAAAATAGGTGAAGGAACAGATCATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_06665847_06684600.mRNA True 4612 mRNA 0.46 27 6665787 6684600

Neighbor

gene id symbol gene type direction distance location
CI01000018_06639339_06649926 NA coding downstream 15816 6639207 ~ 6649971 (-)
CI01000018_06598234_06605351 PLCXD2 coding downstream 59853 6597981 ~ 6605934 (-)
CI01000018_06547019_06585316 PHLDB2 coding downstream 80471 6545849 ~ 6585316 (-)
CI01000018_06503908_06515370 NUP58 coding downstream 150417 6503782 ~ 6515370 (-)
CI01000018_06493607_06502730 ZDHHC20 coding downstream 163057 6493345 ~ 6502730 (-)
CI01000018_06696391_06705674 PTCHD1 coding upstream 11158 6695758 ~ 6705674 (-)
CI01000018_06730933_06741559 PHEX coding upstream 45747 6730347 ~ 6742049 (-)
CI01000018_06757523_06763462 MBTPS2 coding upstream 72156 6756756 ~ 6764763 (-)
CI01000018_06789511_06854837 CNKSR2.L, CNKSR2 coding upstream 104695 6789295 ~ 6854837 (-)
CI01000018_06881855_06890718 CHRND coding upstream 196999 6881599 ~ 6890718 (-)
G106543 NA non-coding downstream 125113 6540436 ~ 6540674 (-)
G106541 NA non-coding downstream 127620 6537883 ~ 6538167 (-)
G106539 NA non-coding downstream 129139 6536343 ~ 6536648 (-)
G106495 NA non-coding downstream 174024 6491240 ~ 6491763 (-)
G106579 NA non-coding upstream 23184 6707784 ~ 6707988 (-)
G106581 NA non-coding upstream 29203 6713803 ~ 6714006 (-)
G106663 NA non-coding upstream 339471 7024071 ~ 7024676 (-)
G106672 NA non-coding upstream 341071 7025671 ~ 7033706 (-)
G106538 NA other downstream 132275 6530447 ~ 6533512 (-)
CI01000018_06021105_06025859 NA other downstream 639911 6020861 ~ 6025876 (-)
CI01000018_04856240_04875704 DAP other downstream 1789948 4855081 ~ 4876532 (-)
G105200 NA other downstream 2419777 4243467 ~ 4246010 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023481 adgrg2a coding NC_007135.7 CM002908.2 25285758 ~ 25301711 (-)