XLOC_023481 (adgrg2a)


Basic Information

Item Value
gene id XLOC_023481
gene name adgrg2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 25285758 ~ 25301711 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046456
ATGCCAGTTAATGCAACTCTGAACACAACAGATTCCTCATTTAAAACAACGCAATCAAACACAACAGACTTGGCAATAAACACAACAGCTATGCCAGTTAATGCAACTCTGAACACAACAGATTCCTCATTTAAAACAACGCAATCAAACACAACAGACTTGGCTATAAACACAACAGCTATGCCAATGAATGTAACTTTAAACACAACAGATTACATGTTCAATACAACACAATCAAACACAACAGACTTGGCTATAAACACAACAGCTATGCCAGTGAATGTAACTCTGAACACAACAGATTCCCCATTCAATACAACACAATCAAACACAACAACCTTGGCTATAAACACAACAGCTATGCCAGTGAATGTAACGTTGAACACAACAGATTCCTTATTCAATACAACACAATCAAACACAACAGACATGGCTATAAACACAACAGCTATGCCAGTGAATGTAACGTTGAACACAACAGATTCCCCATTCAATACAACACAATCAAACACAACAACCTTGGCTATAAACACAACCACTATGCCAGTTAATGTAACTTTGAACACAACAGATTCCATGTTCAATATAACACAATCAAATACAACAGACTTGGCTATAAACACAACCGCTATGCCAGTTAATGTAACGATGAACACAACAGATTCCCCTTTCAATACAACACAATCAAACACAACAGACTTGGCAATAAACACAACTGCTATGCCAGTTAATGTAACGTTGAACACAACAGATTCCCCATTCAATACAACACAATCAAACACAACAGACTTGGTAAAAAAGACAACAGCTATACAGATGAATACCACCAGCTTCAACAATACTAGTGTCAGTCCTATCATAGACAACAGAGAATCCTCCAATAACACAACAGAAAATATTACCAGTGTGCCAACTACAGTGTCTGTCACGACTGTTAGTCTCCTTAACACAACAGATTCAGCTGTTATTGAAAATACAGACAGTAATACAACTACTACAATAACCCCAACCACTGCTCCAAAAAACACACCAACAAATGCAACTATTATTGACACAACCACAAGCTCCACTTCAACAACAGCACCTCCAACTCTTGCTCCAAATTCAACTACTACAATCACCACCACTCCAAATGTTCCATCAACTTCCACTGCTACCACGGCAACCACTTCAGCAACAACTGAAAGCCCAGATGAAGTTGCTGGTAATCTTCTAAATCAAACCCAGGATATATCATCTCTAAACTCAAGTGAGGTGAACCAGCTGATCAGCAAGCTAGAGAATATTCTCTCTGCACCGAATATTAGTGTGGATCTGGGTCGAACTGTGCTTGGGGTCATCAACAACTGTCTAAACAGCACTTCAGGAACTCTGGGTTCCTCCTCAAACCGGTTAATCAAAGCTGTGGATGATTTGGCTCTAAAACTTGTGATTCCGGACCAGTTTGTAAACCTTGTTTTTGATTCACTCGCGTTGACTGTAGCCAAAGTCGATGGGACCAATTTTAGGCCAACATCCTTTTCAATTGCAGATCCCTTAAACCCACAGgtcACAAAATCACTTCAAAGATCAGTCAGGGCTGTGGGAAGTTCCTCCCCAAACCTAGGAAAAGTAACACTGCCGGCATCTCTAACTGAAAATCTCTCTCCAGAGGAACAAAAGATGGCCTCTAGGGTCCAGTTCACATTCTATCAGAAATCCACTTTTTTTCAGGATGCAAATCTGAACCAAAAGAAGCTGAATAGCTACATTCTGGGCTCTAGCGTGGCTAACCTGTCAATCAGAAACCTGAGAGAGAACATAGAGTTTACTCTGATGAATAAGCAGCCTGTTGCGGGAAACTATGTAGCTGTTTGTGTTTTCTGGGATTTTGACAAAAATGAAGGGTTAGGAGGCTGGAATAGGGATGGCTGCAGTGTCATGAACAGCAGCACAGAGAACGAAACCATCTGCAGCTGCAGTCATCTGACCAGCTTTGCAGTGCTCATGGATATTAGCCAGCAAGGTGTAACTGACAGAATGCAGGCCACCATCCTCACCTTCATCTCTTACATTGGATGCGGAGTGTCTGCCATCTTTCTTTCAGTCACTTTACTCACTTACCTCTCATTTGACAAAATCCGTCGGGACATTCCTTCGAAGATCTTGATCCATTTGTGTTTCGCACTGCTTTTCCTGAACCTGGTGTTCTTGTTGGACTCGTGGCTTGCGCTGTACACAGACGCAGTGGGTCTGTGCATTTCTACAGCCTTCTTCCTTCACTACTTTCTGTTGGTCTCCTTCACCTGGATGGGGCTGGAGGCTCTGCATATGTATCTGGCCATCGTCAAGGTCTTTAACAACTTCATGTCCCGATACATGCTGAAGTTCTCTCTGATTGGCTGGGGAGTGCCTTTGGCTGTCGTCATTATTGTGATTGCGATAAACAAAGATAACTACGGCCTCATAAGCTATGGGAAATTTTCTGATGGCACAACAGATGATTTTTGTTGGCTGAAAAATAGCACAGCATTCTATGTGGCTGTTGTGGCATATTTCTGCATCATATTTGTTCTAAACCTGGCCATGTTTGTGGTGGTGATGGTCCATCTGAGACGAATCAAGCGCAGAAACCCTCACAATAACCAGTACCGCAGTGGCGTGCAAGACCTTCGTAGCATCGCGGGACTCACTTTCCTGCTGGGCCTTACATGGGGCTTTGCCTTCTTCGCCTGGGGACCTGTCAACTTGGCCTTCACGTATCTGTTTTCCATCTTCAACTGCCTTCAGGgcttttttatttttgttttccacTGCGCTCTGAAGGAAAATGTGCGTAAAGAGTGGAGAATATACCTCTGCTGTGGCAGTTTACGACTGCCTGAAAATTCAGAGTGGAGTCGGACAGCCACACAAAGCCAGAACACCAAGAAGACTTCAATTATGACAGCAGACTCATCTAATTCGGGGACAAACAGTGCGCCACGAAGCTCAGTGAGCAGCGATGATTCAGTGCCGTCCCATGGCATCGGCTCACCGTTTGACGACAGTACAATCATGTCAGAGGAAGTGAATGATGATGTGGTCATCAACGAGATCAACAGTCAGCTCCATTCAAGACCCAGATCTGTGTAG

Function

symbol description
adgrg2a Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including eye; heart; integument; muscle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in X-linked congenital bilateral absence of vas deferens. Orthologous to human ADGRG2 (adhesion G protein-coupled receptor G2).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004888 transmembrane signaling receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-206 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including eye; heart; integument; muscle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in X-linked congenital bilateral absence of vas deferens. Orthologous to human ADGRG2 (adhesion G protein-coupled receptor G2).

Ensembl:

ensembl_id ENSDARG00000088137

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046456 True 3114 mRNA 0.43 14 25285758 25301711

Neighbor

gene id symbol gene type direction distance location
XLOC_023480 hhla2b.1 coding downstream 29088 25244946 ~ 25256670 (-)
XLOC_023479 hhla2b.2 coding downstream 41120 25236381 ~ 25244638 (-)
XLOC_023478 plcxd2 coding downstream 98863 25173470 ~ 25186895 (-)
XLOC_023477 phldb2b coding downstream 119038 25092316 ~ 25166720 (-)
XLOC_023476 nup58 coding downstream 255515 25008211 ~ 25030243 (-)
XLOC_023482 ptchd1 coding upstream 45792 25347503 ~ 25364775 (-)
XLOC_023483 phex coding upstream 102647 25404358 ~ 25442346 (-)
XLOC_023484 mbtps2 coding upstream 146200 25447911 ~ 25461267 (-)
XLOC_023485 cnksr2a coding upstream 183553 25485264 ~ 25673442 (-)
XLOC_023486 chrnd coding upstream 381360 25683071 ~ 25691020 (-)
XLOC_023665 dre-mir-735 misc upstream 12876250 38177961 ~ 38178027 (-)
XLOC_023471 NA non-coding downstream 456357 24800776 ~ 24829401 (-)
XLOC_023468 NA non-coding downstream 590001 24553793 ~ 24695757 (-)
XLOC_023466 NA non-coding downstream 782736 24416324 ~ 24503022 (-)
XLOC_023467 NA non-coding downstream 793241 24492203 ~ 24492517 (-)
XLOC_023461 NA non-coding downstream 1186879 24095316 ~ 24098879 (-)
XLOC_023487 NA non-coding upstream 448925 25750636 ~ 25754146 (-)
XLOC_023490 NA non-coding upstream 729537 26031248 ~ 26032271 (-)
XLOC_023491 NA non-coding upstream 930989 26232700 ~ 26236578 (-)
XLOC_023496 NA non-coding upstream 1052985 26354696 ~ 26369185 (-)
XLOC_023503 NA non-coding upstream 1340188 26641899 ~ 26648023 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_06665847_06684600 NA coding CI01000018 null 6665787 ~ 6684600 (-)