XLOC_023482 (ptchd1)


Basic Information

Item Value
gene id XLOC_023482
gene name ptchd1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 25347503 ~ 25364775 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046457
ATCATACACTATTTTAGCGTTTAGATTAGATGTCTTTTTATTAAAAGGGTAGCAAATTGTAACCTAGGCTGGCTTGCGCTGACTGCGCCCCATAATTAGCCTACTGACAAAAAGAAAAAGTCGTGCCCTTTGAAAAGTCTTTGAGTATTTCGCACCATggcattgcaaatgcataaaaacaCCCAAAACTGTCCAGTGTAATTTAAATCTGACTTTGTTTCCTTTGAAGTAAATACAGTACTAACCAAGTGTCTCTGACCTAGCAGGACCTGATGAGATTCAGCGCTACGCTTCATCATTTCAGTGATCCAGCTGCGTGGGTTGAACACTGATGCTCCGAATCTCTGATGCTGATGTTGGTTCATCGCCCTTGCGCTGTTGCTGCATTCTAGGATGTTGCGACAAGTGTTGCACGAAGGGCTCAGGACGTCATTCCACAAACTGGGCCACTTCGTCGCCAATCACCCGGTGTTTTTCGCCTCAGCGCCCGTGCTGATCTCAATCCTGCTGGGCGCGAGCTTCAGCAGATACCGCATTGAGGAAAACGTGGAGTACCTGTTAGCTCCCAAACACAGCCTGGCGAAGATCGAGGGGAACTTGGTGGATAGTTTGTTCCCAGTGAACCGGTCCAAACACACGCTTTACTCGGACCTGCAAACACCCGGGAGATATGGCCGGGTCATCGTGACTTCGCGCAGGGGGAGCGTGTTGGACCCTCATCACGTCAACTCAGTCTTAAAGCTTCACAACACCATCACTCAGATCCAGGTTCCTATGCTGGGATTTAACTACACATTTGCCCACCTCTGTCTGCTGGATGAGAGCAAGAGCTGCATTGTGGACGACATCCTGCGGGTTCTGGAAGAGATGAGATCGGCGCGGGCATCCAACCATTCAGTACCCCCTCTGCGTTATCCCATCACCAAGCTCAAAGATGGACGGGAGGCCTATATTGGTCACCAACTGGGTGGAGTCCTGGCAAGCGGAGGGAGAGACGGGGTGCGCTCTGCTCGAGCCCTTCAACTCACATACTACCTGCAGGCGGTCAGTCCATTGAATGAAGTGGTTGCGGCCAGCTGGGAGCTGCTGTTTTGCAGGGAGCTGGAGAACTTTGGAAAGGCTCATCCGGAGCTTAGTTTACACCCCTTCACCTCCTCTTCCCTTCAGAGGGACTTTCAAAGAACCAGTCGGGTATCAGAGCGGCCGCTGCTCTTCAGCCTGGCTGTGTGTCTCTCGCTGGCCATGCTGTGCTGTTCAATGCGAGACTGTGTGCGTACAAAGCCCTGGCTGGGTCTGCTGGCTCTGGTGACCGTCAGCCTTGCCACACTCACCTCTGCTGGCATCTTAAACCTCACTGGAGGGAAATACAACTCAACGTACCTGGGGATCCCTTTTGTCATGTTAGGTCATGGCTTGTTTGGCACATTTGAGATGCTGTCGTCTTGGCGACGGACCCGCGAGGACCAGCATGTGAAGGAGCGAGTTGCTGCTGTGTTCTCTGACTGTATGCTGCCCTTCACAGCTAGCACAGCCCTGCATGTAGTCACCTTTGGCATCGGAGCCAGTCCATTCACAAACATTGAAGCTGTGCGACTCTTCTGTCAGAACGCCTGTATCTCAGTCCTCTTCAACTACCTCTACATCCTCACCTTCTATGGCTCCAACCTGGTGTTCGCTGGATACCTGGAAAACAACTATCGTCACAGTTTGTTCTGCAGGCGTGTACCGAAGCCCGAGCTGCTGCAGCAGAAGCCAGCATGGTACCGCTTTCTTATGTACACACATTACAACGAGGAGGCCACGGAAGCAGGACCCCTGTGTGCTTATGAAAGCCACCTACTGGTAGCCTTTATGAAGCGGTACTACTGTGACTGGATCACTAATACCTATGTCAAACCATTCGTGGTTCTTTTCTACTTAGTCTATGTTTCCTTTGCCCTCATGGGCTACCTTCAGGTCAGCGAAGGGTCAGATCTTAGTAATGTGGTTGCCACAGAAACAAGCACTATAGCTTATACTCGTGCCCAACAGCGGTATTTCAGTAGTTACAGTCCTGTGATCGGCTTCTACATCTATGAGTCGATTGAGTACTGGAACACCAGTGTGCAAGAGGACCTACTAGAGTACATTAAAGGTTTTGAACGCATTTCCTGGTTCGAGAGTTACCTTAACTATCTTCATGGGCTGAACATCACTACTAGCCTGTCCCGCAGCAACTTTACAGAGCGCCTGCGCTCTGGCTTTCTGCGTCAACCCCGATACGTGCATTTCACAGATGATATCATCTTTGCCAAACGATCAGATGGGGAATTTGACGTGGTGGCCTCACGTATGTTTCTCATTGCtaaaacaactgaaaacaaaCGAGAGGAGATGTCTATCCTACTGGACACACTGAGGAAACTGTCATTGACCTCCAGGGTAAAATTCATCATCTTCAATCCATCCTTTGTGTATATGGACCGATATGCCTCATCAGTTGGAGCACCGCTGAAGAACTCTTGCATCGCTGCTCTCTTTCTGCTTTTCTTTTCCACCTTCTTGGCAGCTGACCCACTGGTGAATGCTTGGTTGACTGTGACAGTAGCCTCGGTTGAGTTTGGACTGGTTGGTTTCATGACGCTCTGGCGGGTAGAGTTGGACTGCGTCTCAGTACTGTGTTTGATCTACGGGGTGAACTATGCTGTGGACTCCAGTGCTCCACTGGTATCAGCATTTGCTCTAGGCCGTGAATCCACTCGAACACGCTGGGTGAAACTGGCTCTGGAGCAACATGGGGTCCCTGCCTTGCAGAGTTACTTGTGTTACGGGGCAGCTTTGCTTCCTCTTGCAGCCGTGCCCTCAAACCTCACCCGAACGCTCTTTAGGTGCCTCTTTCTCACCGCCATAATCACAGCCTTCCACTGTTTGGCCATTCTTCCTGTCCTGCTCACTTTCCTGCCTCCCTCCAAGAAAAAACGGCGAGAAAGAAAAAATGCTGCAGAAAACAGGGAAGAAATTGAGTGTGTGGAGATGGTGGACAGCACTCGTGTGGTTGATCAGATTACCACTGTCTGACCGCATGCCTAAAAGGGAGGCAGATAAGGATGTACAAGAAAGGAAAAGCCAAAACACCCCCAGGGGGCGATGGAAAGAGACCTGTGAAAGCTGGGCTTTGAAGTTTATGGGCAAAGATGACTTTTAAGTACTTTACAAGTGTACTTAAGCATAACAGGTACAAGCCTACATGTTAAACAAGGCTTTTGTTTGATCATAAATGCAGTTGACAAGTTAAAGATTGAGTTATTGATGCTGAGATGTATCATTGTGATGGCAAAAGCCTTATGCAGGTTTTGCTGCAGCTCAAATGAGAGCGAGGAAGGCCAGATGAACCACACTGCTGAACAGTTGCAGATAATCACAGAGGGAGGGCTCCTCTGGTCTGCAGTATTACAGCAGCAGTAAAGCGGAAACTGTAACAAGCTATTGCTCTGTCAAGGCATAGATAGAGACTTCTGATGCCCCAAGAACCATACAAATAAATTCAGGGGCCAAGCAGCCATATTTGTACCTGCTGATAGCCATGACTTTGATACACCCAGTGTCACCTCCTCCAAAAGGTTTGGTAACACCGTATATTTGTGGGATTATGGGATATAGTGATAGTATCTTTTCAAACTCCCAGATAAGATGAAAGCCACCTCCCCCACAATGACCAATGTGTTGGAGACATTTATGACTGGTCTTTTTAAATAGAacgtaaaaagagaaaaaaatggatTGGAGAAAGTGAAGGACAGAAGGGGGTGGGGATGAGCTTTAGAGATACACAGAAGCAGCAAGCCTCTGCAGACAGGTTGGTATGATGTGAAATTCTTTCAGGGTAATTCATACTCACAATTGAGTTGCATAGTGCATGTTTGATTTCAATTAGAGCATCACTTACCAATTAAGTCACAGTGGAGAGTATATTCTTTGAAGGATTCATGCCTGCTTCTCCTTGCTTATTCTGTTTGTCTCTAAAAATGCTGAAAATCACCTTGTCACAGACAATGCTCTTCATCAATATGCATGAGCTAGAGTCCCTTCGTTTTCACCCTCCTTTGCCCTctgtaaaaaaagagagagagaaagataaagAGACCTGGGGCAGAAATAGAGCAAGGGAAAGGAGCATCTGGCGATCAAATCTACTTTTCAAATTCTCCTCTAAGCCAAAAGCAACTGATGTCAAATCAGTCAAGAGGTTTAACAGACTGTATTTGTGTGGAGAAagagtctctttttttaaacatgtggACTGCGACAATGACATTTATTATGTGTTTGGCAGCTTGTGAATTGGTGCTGATTATAGCTACAAATATAAAGACCAAGAAAAGGGAAAATACATACACATGATCGGATACTTTCGCAATTATAATCTGGCATCTGCAAAATAGTTTTTGATCATTGCCCATCTACTTGACCACTAGAGCTCACCTACTCCATTCTCTTCCTAAGTAGCACTTCAGCCTGCAATCATCTGGAGATATTCCCACACCTATATGGTTAATTAAATCAGCCCATATATATTTACCATGCTAAAGCCTCTCACAGCTGATCTTACTGATCTCCGTGCAGTAGCCAGTACTCAATACTCTCTCTGACTAATCTAAGGATAGTGCTCTGAAAGATTCTCTCAACAATTTAATTAAAGTCTTTTACGATCTCTGAGTGACCCCAGATCAGCAACCCAACAGAAACTTTGACTGATGTAATGTGAGTGTTCAGACAGCTGTCTGATCTCAGAACAGTGCTGTAAATAGGCCTCTTGGTAATTTCTGAAAAACTCTGAAACACATCAATTCATGCTTTTTGTTCAGCACTATTTTGACAGGCCCAAATCATTTATACTTAATTCATATGTTTATTTATCTAAGTTTTCTTAAATTAAGATAGATTTGCACGATACGAAAAACAGCATAATATATTAAAGCTTGTTTTCAAAGaataaatcagttttattattttttagtttttaatttaaagcacAAGTGAGCAAAATATTAAGTTTGCTAATGGAATAAGAACATCAGTCTTTTCCAAGAACGTCTTATAAAACCTtaataattaaagggatagtttaccccaaaatgtaccttaccatttactctccctcatgtggcttcaacatttattatttgctttcttctgttgaacacagaagaagatattttggaaaatgttggtTGCTAACACCTATAGATATTTACATCAGATGTCGCCTACGTTGTTGTTGTCGattggaaggaatgtgtcaatacagccaccattttagtacagggtagcgctccattGAAataaatgtgggaccaaggtgtagTGGAGGGCTGGCCATCTGGAGCCATAGatataaacacatatacatatatctatgattgggagttttcctggtgttcagtatgcaaatattttttaaattatgaaaattcaaaTTTTACATGACTTTTCTCTATTACTGGATAAGTGATCACACAGGCATTGCTGACAATGAGCATGTGTTTATGTGCacggaaatgtattatcctccctcaaTGTTAAATTCCACTTCTAATCCTAACGGAGGGAGCAATTCCTTtatgaatgaatctccattatgaatGACTCGTGTGATATTCCTTCGTCTCAATGTGCAAATCTACCTTTTTCATCTAAATGGtatgaaaattataatattaaattgaGGTGCAGGCACTGTTATCAGACACCcttataagttacttcaaaaactaacattaataataattgaagTTTCTGGTAGCGCAGAATCTttcctgcaggcacaggatgtcaatatgacgtcatattgacgttgtaccccactgtcgtggggacgttggatggtgattggaaatgaaaatcaggttgacatcagaacccgaCATCAGGCccatgtcaatgtccaacatccaacgtAAAATCAACCcgatatcaacgtctaatcatgttacaccttgacgttgtgtggacgttatcactatgacatctatcagacgttgaattttggtcactttccaacacaacaaatcaaccaaatatcaatgtaatttgacgtcgttattggacatcaaaataacgttgtccttagacgctggctagacattgaattttgttcacctgatgtcatgacctaaatctaacctaatattaacgtcataTGATGCTGTGTGCCTGCTTGgttgttgtcatattttatttacattgtttgctgattttttttaacaaaactagcataagcctagaatttagtgcaGGTTGgggctactttgccttatggttggtgcagtaagtgactgtattatcatcaataacatgatttgtttagcacaaaagattgtaactaataaaaatagtaaaaaaacgaaatcttacctaTAAAATGCTCTGCCTTTATGCTTTATCTAAACCCGTACCCAGctcaaaagtccagcatcttcagattggctttagtcttgacaaGTGCGGTTGAAGGATTTTGTTCTGGGAGCACTGTActaatatggcggcgctattgatgcatgcaatatctagtgtataagTCTATGGCCAGCACCCATCAACTTTAATagtaggaaaataaaaaaaaattcaatgggtctgtcagtgggtgccagcaaacagcatttttcagaataaatatatttttgtagaaagaaactgaaataggTTTTGATCAAAAAAAGGGTGGGAAAATTATccctttaattcaatttaatcagTATATCCATCTATCTTCATAGTCTTCATAGTCAGCAGTgcggggttttttttttcttcttttttgtggGTGAAATGTTTCTGTTATCTGTACTTGACTGTACTTGAAAGTGTGTGCCCTTAAAGAGAAATATCATGAACCTAGAATGATCTTCATTTTATAAATGAAGCTTAAAAGTTCATGTCTAATATGGTCTCTTATTTGTCCTCCTTGACTTGTCAAAACTGCTGGATTTGAACATTCAATGCAAAGTTGTTCACATACCTCTGCCTTCATACAGATTCACTCAGGCTtacatcattttattttgtttgtataaCACCTCCACTATTATATTCAGTCCAAATGTGATTGCTGTGAAGCAGTATTGGCACAAGGCCCTTTGAAGATGTCAAAGCCAGTGGGAAGAAtgagtgaaaaaaaatatatgctaCACCCACACTGgtttgcacacatacacaaatttaGCTTACAGTACATGCATTCTACCTGACTGATATGCCTCTGGAgatgattgttgttgttgttttttaagtttgTTTCTATGAATTTcagaagaattaaaataaaagaggGTGAATTTAAATCATCAtttgtttgtgttattattattatttttattattgttattattattattattattattaggataaATTGTTATGCTCCATTTCAGTTTAGCAGAATGCTGCCATCTAGTGTTCATAACATTTTTATGACAAGTAGACG
>TCONS_00046458
GGCTCCTCGAGAAACTGGAACTTCAGAATCTGCTTCGTAACTGAGCAATTAAGTGCCGCATCGGGCTAATTTGTGCTGTTTTGTATGTGGAGCTGTGTTGTGCTCCGCGCAATAACAAATGCTTTAACTCGGGAAGGAAATGCACACAAGTGAAAGGGCTGGAGCTGCGCGGAGCCCCTCGCATTCTGCACCGCGGGTCGGTGGTGGACATTCGTGTTTTCAGACTGGTAACAGCGGATAGCGGTCGTGCTGGGCGCGGTGCGGGATTACTATGGATCAATGACACACACCTCATAGATAATGGAATACACAAAACTGTATTTGCGCATTTGGAACTGTTTGTAAGTATGACCAGTTCACTGTTAAAATACACCGATCTGTACCTACTGGATTCATCATATCAAAGACGCTGTGGAGATATTCAAAGAGAAAAGTGATTCGCTTCTATTACAAGACATGAGCATATCATCTCTGGCACTAGGATCAACGACGTATTTATGGAAATTGGGTCTCTCAGATGGCATGAAACTGCAAAGACGTGACTGGACCTGATGAGATTCAGCGCTACGCTTCATCATTTCAGTGATCCAGCTGCGTGGGTTGAACACTGATGCTCCGAATCTCTGATGCTGATGTTGGTTCATCGCCCTTGCGCTGTTGCTGCATTCTAGGATGTTGCGACAAGTGTTGCACGAAGGGCTCAGGACGTCATTCCACAAACTGGGCCACTTCGTCGCCAATCACCCGGTGTTTTTCGCCTCAGCGCCCGTGCTGATCTCAATCCTGCTGGGCGCGAGCTTCAGCAGATACCGCATTGAGGAAAACGTGGAGTACCTGTTAGCTCCCAAACACAGCCTGGCGAAGATCGAGGGGAACTTGGTGGATAGTTTGTTCCCAGTGAACCGGTCCAAACACACGCTTTACTCGGACCTGCAAACACCCGGGAGATATGGCCGGGTCATCGTGACTTCGCGCAGGGGGAGCGTGTTGGACCCTCATCACGTCAACTCAGTCTTAAAGCTTCACAACACCATCACTCAGATCCAGGTTCCTATGCTGGGATTTAACTACACATTTGCCCACCTCTGTCTGCTGGATGAGAGCAAGAGCTGCATTGTGGACGACATCCTGCGGGTTCTGGAAGAGATGAGATCGGCGCGGGCATCCAACCATTCAGTACCCCCTCTGCGTTATCCCATCACCAAGCTCAAAGATGGACGGGAGGCCTATATTGGTCACCAACTGGGTGGAGTCCTGGCAAGCGGAGGGAGAGACGGGGTGCGCTCTGCTCGAGCCCTTCAACTCACATACTACCTGCAGGCGGTCAGTCCATTGAATGAAGTGGTTGCGGCCAGCTGGGAGCTGCTGTTTTGCAGGGAGCTGGAGAACTTTGGAAAGGCTCATCCGGAGCTTAGTTTACACCCCTTCACCTCCTCTTCCCTTCAGAGGGACTTTCAAAGAACCAGTCGGGTATCAGAGCGGCCGCTGCTCTTCAGCCTGGCTGTGTGTCTCTCGCTGGCCATGCTGTGCTGTTCAATGCGAGACTGTGTGCGTACAAAGCCCTGGCTGGGTCTGCTGGCTCTGGTGACCGTCAGCCTTGCCACACTCACCTCTGCTGGCATCTTAAACCTCACTGGAGGGAAATACAACTCAACGTACCTGGGGATCCCTTTTGTCATGTTAGGTCATGGCTTGTTTGGCACATTTGAGATGCTGTCGTCTTGGCGACGGACCCGCGAGGACCAGCATGTGAAGGAGCGAGTTGCTGCTGTGTTCTCTGACTGTATGCTGCCCTTCACAGCTAGCACAGCCCTGCATGTAGTCACCTTTGGCATCGGAGCCAGTCCATTCACAAACATTGAAGCTGTGCGACTCTTCTGTCAGAACGCCTGTATCTCAGTCCTCTTCAACTACCTCTACATCCTCACCTTCTATGGCTCCAACCTGGTGTTCGCTGGATACCTGGAAAACAACTATCGTCACAGTTTGTTCTGCAGGCGTGTACCGAAGCCCGAGCTGCTGCAGCAGAAGCCAGCATGGTACCGCTTTCTTATGTACACACATTACAACGAGGAGGCCACGGAAGCAGGACCCCTGTGTGCTTATGAAAGCCACCTACTGGTAGCCTTTATGAAGCGGTACTACTGTGACTGGATCACTAATACCTATGTCAAACCATTCGTGGTTCTTTTCTACTTAGTCTATGTTTCCTTTGCCCTCATGGGCTACCTTCAGGTCAGCGAAGGGTCAGATCTTAGTAATGTGGTTGCCACAGAAACAAGCACTATAGCTTATACTCGTGCCCAACAGCGGTATTTCAGTAGTTACAGTCCTGTGATCGGCTTCTACATCTATGAGTCGATTGAGTACTGGAACACCAGTGTGCAAGAGGACCTACTAGAGTACATTAAAGGTTTTGAACGCATTTCCTGGTTCGAGAGTTACCTTAACTATCTTCATGGGCTGAACATCACTACTAGCCTGTCCCGCAGCAACTTTACAGAGCGCCTGCGCTCTGGCTTTCTGCGTCAACCCCGATACGTGCATTTCACAGATGATATCATCTTTGCCAAACGATCAGATGGGGAATTTGACGTGGTGGCCTCACGTATGTTTCTCATTGCtaaaacaactgaaaacaaaCGAGAGGAGATGTCTATCCTACTGGACACACTGAGGAAACTGTCATTGACCTCCAGGGTAAAATTCATCATCTTCAATCCATCCTTTGTGTATATGGACCGATATGCCTCATCAGTTGGAGCACCGCTGAAGAACTCTTGCATCGCTGCTCTCTTTCTGCTTTTCTTTTCCACCTTCTTGGCAGCTGACCCACTGGTGAATGCTTGGTTGACTGTGACAGTAGCCTCGGTTGAGTTTGGACTGGTTGGTTTCATGACGCTCTGGCGGGTAGAGTTGGACTGCGTCTCAGTACTGTGTTTGATCTACGGGGTGAACTATGCTGTGGACTCCAGTGCTCCACTGGTATCAGCATTTGCTCTAGGCCGTGAATCCACTCGAACACGCTGGGTGAAACTGGCTCTGGAGCAACATGGGGTCCCTGCCTTGCAGAGTTACTTGTGTTACGGGGCAGCTTTGCTTCCTCTTGCAGCCGTGCCCTCAAACCTCACCCGAACGCTCTTTAGGTGCCTCTTTCTCACCGCCATAATCACAGCCTTCCACTGTTTGGCCATTCTTCCTGTCCTGCTCACTTTCCTGCCTCCCTCCAAGAAAAAACGGCGAGAAAGAAAAAATGCTGCAGAAAACAGGGAAGAAATTGAGTGTGTGGAGATGGTGGACAGCACTCGTGTGGTTGATCAGATTACCACTGTCTGACCGCATGCCTAAAAGGGAGGCAGATAAGGATGTACAAGAAAGGAAAAGCCAAAACACCCCCAGGGGGCGATGGAAAGAGACCTGTGAAAGCTGGGCTTTGAAGTTTATGGGCAAAGATGACTTTTAAGTACTTTACAAGTGTACTTAAGCATAACAGGTACAAGCCTACATGTTAAACAAGGCTTTTGTTTGATCATAAATGCAGTTGACAAGTTAAAGATTGAGTTATTGATGCTGAGATGTATCATTGTGATGGCAAAAGCCTTATGCAGGTTTTGCTGCAGCTCAAATGAGAGCGAGGAAGGCCAGATGAACCACACTGCTGAACAGTTGCAGATAATCACAGAGGGAGGGCTCCTCTGGTCTGCAGTATTACAGCAGCAGTAAAGCGGAAACTGTAACAAGCTATTGCTCTGTCAAGGCATAGATAGAGACTTCTGATGCCCCAAGAACCATACAAATAAATTCAGGGGCCAAGCAGCCATATTTGTACCTGCTGATAGCCATGACTTTGATACACCCAGTGTCACCTCCTCCAAAAGGTTTGGTAACACCGTATATTTGTGGGATTATGGGATATAGTGATAGTATCTTTTCAAACTCCCAGATAAGATGAAAGCCACCTCCCCCACAATGACCAATGTGTTGGAGACATTTATGACTGGTCTTTTTAAATAGAacgtaaaaagagaaaaaaatggatTGGAGAAAGTGAAGGACAGAAGGGGGTGGGGATGAGCTTTAGAGATACACAGAAGCAGCAAGCCTCTGCAGACAGGTTGGTATGATGTGAAATTCTTTCAGGGTAATTCATACTCACAATTGAGTTGCATAGTGCATGTTTGATTTCAATTAGAGCATCACTTACCAATTAAGTCACAGTGGAGAGTATATTCTTTGAAGGATTCATGCCTGCTTCTCCTTGCTTATTCTGTTTGTCTCTAAAAATGCTGAAAATCACCTTGTCACAGACAATGCTCTTCATCAATATGCATGAGCTAGAGTCCCTTCGTTTTCACCCTCCTTTGCCCTctgtaaaaaaagagagagagaaagataaagAGACCTGGGGCAGAAATAGAGCAAGGGAAAGGAGCATCTGGCGATCAAATCTACTTTTCAAATTCTCCTCTAAGCCAAAAGCAACTGATGTCAAATCAGTCAAGAGGTTTAACAGACTGTATTTGTGTGGAGAAagagtctctttttttaaacatgtggACTGCGACAATGACATTTATTATGTGTTTGGCAGCTTGTGAATTGGTGCTGATTATAGCTACAAATATAAAGACCAAGAAAAGGGAAAATACATACACATGATCGGATACTTTCGCAATTATAATCTGGCATCTGCAAAATAGTTTTTGATCATTGCCCATCTACTTGACCACTAGAGCTCACCTACTCCATTCTCTTCCTAAGTAGCACTTCAGCCTGCAATCATCTGGAGATATTCCCACACCTATATGGTTAATTAAATCAGCCCATATATATTTACCATGCTAAAGCCTCTCACAGCTGATCTTACTGATCTCCGTGCAGTAGCCAGTACTCAATACTCTCTCTGACTAATCTAAGGATAGTGCTCTGAAAGATTCTCTCAACAATTTAATTAAAGTCTTTTACGATCTCTGAGTGACCCCAGATCAGCAACCCAACAGAAACTTTGACTGATGTAATGTGAGTGTTCAGACAGCTGTCTGATCTCAGAACAGTGCTGTAAATAGGCCTCTTGGTAATTTCTGAAAAACTCTGAAACACATCAATTCATGCTTTTTGTTCAGCACTATTTTGACAGGCCCAAATCATTTATACTTAATTCATATGTTTATTTATCTAAGTTTTCTTAAATTAAGATAGATTTGCACGATACGAAAAACAGCATAATATATTAAAGCTTGTTTTCAAAGaataaatcagttttattattttttagtttttaatttaaagcacAAGTGAGCAAAATATTAAGTTTGCTAATGGAATAAGAACATCAGTCTTTTCCAAGAACGTCTTATAAAACCTtaataattaaagggatagtttaccccaaaatgtaccttaccatttactctccctcatgtggct

Function

symbol description
ptchd1 Predicted to be involved in chemical synaptic transmission and cognition. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and synapse. Human ortholog(s) of this gene implicated in autistic disorder. Orthologous to human PTCHD1 (patched domain containing 1).

GO:

id name namespace
GO:0050890 cognition biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0045202 synapse cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-061220-1 Predicted to be involved in chemical synaptic transmission and cognition. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and synapse. Human ortholog(s) of this gene implicated in autistic disorder. Orthologous to human PTCHD1 (patched domain containing 1).

Ensembl:

ensembl_id ENSDARG00000018066

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046457 False 7468 mRNA 0.42 3 25347503 25363815
TCONS_00046458 True 5427 mRNA 0.46 4 25349823 25364775

Neighbor

gene id symbol gene type direction distance location
XLOC_023481 adgrg2a coding downstream 45792 25285758 ~ 25301711 (-)
XLOC_023480 hhla2b.1 coding downstream 90833 25244946 ~ 25256670 (-)
XLOC_023479 hhla2b.2 coding downstream 102865 25236381 ~ 25244638 (-)
XLOC_023478 plcxd2 coding downstream 160608 25173470 ~ 25186895 (-)
XLOC_023477 phldb2b coding downstream 180783 25092316 ~ 25166720 (-)
XLOC_023483 phex coding upstream 39583 25404358 ~ 25442346 (-)
XLOC_023484 mbtps2 coding upstream 83136 25447911 ~ 25461267 (-)
XLOC_023485 cnksr2a coding upstream 120489 25485264 ~ 25673442 (-)
XLOC_023486 chrnd coding upstream 318296 25683071 ~ 25691020 (-)
XLOC_023487 NA coding upstream 385861 25750636 ~ 25754146 (-)
XLOC_023665 dre-mir-735 misc upstream 12813186 38177961 ~ 38178027 (-)
XLOC_023471 NA non-coding downstream 518102 24800776 ~ 24829401 (-)
XLOC_023468 NA non-coding downstream 651746 24553793 ~ 24695757 (-)
XLOC_023466 NA non-coding downstream 844481 24416324 ~ 24503022 (-)
XLOC_023467 NA non-coding downstream 854986 24492203 ~ 24492517 (-)
XLOC_023461 NA non-coding downstream 1248624 24095316 ~ 24098879 (-)
XLOC_023490 NA non-coding upstream 666473 26031248 ~ 26032271 (-)
XLOC_023491 NA non-coding upstream 867925 26232700 ~ 26236578 (-)
XLOC_023496 NA non-coding upstream 989921 26354696 ~ 26369185 (-)
XLOC_023503 NA non-coding upstream 1277124 26641899 ~ 26648023 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_06696391_06705674 PTCHD1 coding CI01000018 null 6695758 ~ 6705674 (-)
bowfin (Amia calva) AMCG00016540 NA coding CM030122.1 CM030122.1 24669212 ~ 24683200 (+)