Gene
RNA
| Item | Value |
|---|---|
| gene id | G123812 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 4023786 ~ 4024060 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140587 | True | 275 | lncRNA | 0.32 | 1 | 4023786 | 4024060 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_03964560_03976364 | VPS16 | coding | downstream | 47422 | 3964254 ~ 3976364 (-) |
| CI01000024_03957940_03962240 | RGN | coding | downstream | 61546 | 3957504 ~ 3962240 (-) |
| CI01000024_03950623_03954365 | NA | coding | downstream | 69394 | 3949910 ~ 3954392 (-) |
| CI01000024_03945597_03947286 | NA | coding | downstream | 76500 | 3945535 ~ 3947286 (-) |
| CI01000024_03938368_03941795 | NA | coding | downstream | 81991 | 3938315 ~ 3941924 (-) |
| CI01000024_04128028_04128273 | NA | coding | upstream | 103009 | 4127069 ~ 4128528 (-) |
| CI01000024_04244945_04245709 | NA | coding | upstream | 220228 | 4244288 ~ 4245767 (-) |
| CI01000024_04262881_04279056 | USP40 | coding | upstream | 238493 | 4262553 ~ 4279217 (-) |
| CI01000024_04280957_04294789 | TSPEARA | coding | upstream | 256374 | 4280434 ~ 4294789 (-) |
| CI01000024_04306066_04310552 | UBE2G2 | coding | upstream | 281584 | 4305644 ~ 4310552 (-) |
| G123806 | NA | non-coding | downstream | 3991 | 4019415 ~ 4019795 (-) |
| G123730 | NA | non-coding | downstream | 36178 | 3987394 ~ 3987608 (-) |
| G123728 | NA | non-coding | downstream | 47588 | 3975948 ~ 3976198 (-) |
| G123723 | NA | non-coding | downstream | 88847 | 3934726 ~ 3934939 (-) |
| G123698 | NA | non-coding | downstream | 131417 | 3892163 ~ 3892369 (-) |
| G123822 | NA | non-coding | upstream | 18831 | 4042891 ~ 4043149 (-) |
| G123833 | NA | non-coding | upstream | 32517 | 4056577 ~ 4056782 (-) |
| G123837 | NA | non-coding | upstream | 55315 | 4079375 ~ 4079719 (-) |
| G123835 | NA | non-coding | upstream | 87436 | 4111496 ~ 4111820 (-) |
| G123798 | NA | non-coding | upstream | 93490 | 4117550 ~ 4121505 (-) |
| G123233 | NA | other | downstream | 1468750 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 3196935 | 824968 ~ 838550 (-) |
| G125457 | NA | other | upstream | 3333177 | 7357237 ~ 7358104 (-) |
| G125798 | NA | other | upstream | 3951607 | 7975667 ~ 7976047 (-) |
