XLOC_008336 (CU856523.1)


Basic Information

Item Value
gene id XLOC_008336
gene name CU856523.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 10485534 ~ 10487195 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016720
ttaaacagaaatgcagttagtcaagaaaaCTGGATGTTGAATtatatgtacagatttgttatacaTGTACAGGGTAAAGGgggctgtgtacaaatgcgaatgtagaaagtattgcattgcatattgatataaggtgctgTGTGTATGAGAAAATATAGGAgatatttattgcacagttgggtGGATATTTAACTGGAggaaaataaacttttttgtgtgtctggctgtttttgttcttggtgctctgaagcgcaGACCAGACAGTAACAGTTggaacaggtagtgtgctggatGCGAttcgtccagagtgattttgcaagCCCTTTTACTCACTTTGGAAGAGttcagttcttgaagtgtagTGCCAGTGATACGTTCAGCAGTAcggactattcgctgtagtct

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101444

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016720 True 405 lncRNA 0.40 2 10485534 10487195

Neighbor

gene id symbol gene type direction distance location
XLOC_008335 BX000985.2 coding upstream 589548 9895858 ~ 9895986 (+)
XLOC_008334 BX000985.1 coding upstream 601721 9878848 ~ 9883813 (+)
XLOC_008333 si:dkey-13m3.2 coding upstream 612390 9861973 ~ 9873144 (+)
XLOC_008332 NA coding upstream 800619 9680021 ~ 9684915 (+)
XLOC_008331 NA coding upstream 836078 9640687 ~ 9649456 (+)
XLOC_008337 CT573316.1 coding downstream 263013 10750208 ~ 10756943 (+)
XLOC_008338 NA coding downstream 264876 10752071 ~ 10754765 (+)
XLOC_008339 BX323573.1 coding downstream 376655 10863850 ~ 10866560 (+)
XLOC_008340 CR538726.1 coding downstream 816130 11303325 ~ 11305074 (+)
XLOC_008341 si:ch73-321d9.2 coding downstream 894337 11381532 ~ 11394322 (+)
XLOC_008463 BX663520.1 misc downstream 10764996 21252191 ~ 21252282 (+)
XLOC_008330 CR936974.1 non-coding upstream 1028152 9451978 ~ 9457382 (+)
XLOC_008343 BX324136.1 non-coding downstream 1078196 11565391 ~ 11565509 (+)

Expression


Co-expression Network