Gene
RNA
| Item | Value |
|---|---|
| gene id | G125801 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 7980858 ~ 7981094 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142843 | True | 237 | lncRNA | 0.49 | 1 | 7980858 | 7981094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_07858315_07901816 | NA | coding | downstream | 78920 | 7858157 ~ 7901938 (-) |
| CI01000024_07847824_07855700 | NA | coding | downstream | 124517 | 7847573 ~ 7856341 (-) |
| CI01000024_07697986_07832289 | PTPRFB, PTPRF, PTPRFA | coding | downstream | 148569 | 7697986 ~ 7832289 (-) |
| CI01000024_07672858_07695341 | KDM4AB, KDM4A | coding | downstream | 285033 | 7672593 ~ 7695825 (-) |
| CI01000024_07604312_07619531 | ST3GAL3, ST3GAL3A, ST3GAL3B | coding | downstream | 361327 | 7604312 ~ 7619531 (-) |
| CI01000024_08161023_08259943 | SZT2 | coding | upstream | 179196 | 8160290 ~ 8259943 (-) |
| CI01000024_08260814_08264845 | SZT2 | coding | upstream | 279720 | 8260814 ~ 8264845 (-) |
| CI01000024_08292984_08380058 | PBX1.S, PBX1A, PBX1B, PBX1 | coding | upstream | 311890 | 8292984 ~ 8380058 (-) |
| CI01000024_08450580_08455758 | NA | coding | upstream | 469468 | 8450562 ~ 8457764 (-) |
| CI01000024_08460577_08479254 | NA | coding | upstream | 479375 | 8460469 ~ 8479690 (-) |
| G125798 | NA | non-coding | downstream | 4811 | 7975667 ~ 7976047 (-) |
| G125722 | NA | non-coding | downstream | 45301 | 7916804 ~ 7935557 (-) |
| G125724 | NA | non-coding | downstream | 64759 | 7905914 ~ 7916099 (-) |
| G125726 | NA | non-coding | downstream | 163371 | 7802573 ~ 7817487 (-) |
| G125802 | NA | non-coding | upstream | 1820 | 7982914 ~ 7983167 (-) |
| G125819 | NA | non-coding | upstream | 34558 | 8015652 ~ 8015945 (-) |
| G125825 | NA | non-coding | upstream | 46688 | 8027782 ~ 8027990 (-) |
| G125827 | NA | non-coding | upstream | 53215 | 8034309 ~ 8034634 (-) |
| G125835 | NA | non-coding | upstream | 62814 | 8043908 ~ 8044118 (-) |
| G125457 | NA | other | downstream | 622754 | 7357237 ~ 7358104 (-) |
| CI01000024_03938368_03941795 | NA | other | downstream | 4038934 | 3938315 ~ 3941924 (-) |
| G123233 | NA | other | downstream | 5425822 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 7154007 | 824968 ~ 838550 (-) |
