Gene
RNA
| Item | Value |
|---|---|
| gene id | G125835 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 8043908 ~ 8044118 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142877 | True | 211 | lncRNA | 0.32 | 1 | 8043908 | 8044118 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_07858315_07901816 | NA | coding | downstream | 141970 | 7858157 ~ 7901938 (-) |
| CI01000024_07847824_07855700 | NA | coding | downstream | 187567 | 7847573 ~ 7856341 (-) |
| CI01000024_07697986_07832289 | PTPRFB, PTPRF, PTPRFA | coding | downstream | 211619 | 7697986 ~ 7832289 (-) |
| CI01000024_07672858_07695341 | KDM4AB, KDM4A | coding | downstream | 348083 | 7672593 ~ 7695825 (-) |
| CI01000024_07604312_07619531 | ST3GAL3, ST3GAL3A, ST3GAL3B | coding | downstream | 424377 | 7604312 ~ 7619531 (-) |
| CI01000024_08161023_08259943 | SZT2 | coding | upstream | 116172 | 8160290 ~ 8259943 (-) |
| CI01000024_08260814_08264845 | SZT2 | coding | upstream | 216696 | 8260814 ~ 8264845 (-) |
| CI01000024_08292984_08380058 | PBX1.S, PBX1A, PBX1B, PBX1 | coding | upstream | 248866 | 8292984 ~ 8380058 (-) |
| CI01000024_08450580_08455758 | NA | coding | upstream | 406444 | 8450562 ~ 8457764 (-) |
| CI01000024_08460577_08479254 | NA | coding | upstream | 416351 | 8460469 ~ 8479690 (-) |
| G125827 | NA | non-coding | downstream | 9274 | 8034309 ~ 8034634 (-) |
| G125825 | NA | non-coding | downstream | 15918 | 8027782 ~ 8027990 (-) |
| G125819 | NA | non-coding | downstream | 27963 | 8015652 ~ 8015945 (-) |
| G125802 | NA | non-coding | downstream | 60741 | 7982914 ~ 7983167 (-) |
| G125801 | NA | non-coding | downstream | 62814 | 7980858 ~ 7981094 (-) |
| G125846 | NA | non-coding | upstream | 14764 | 8058882 ~ 8059124 (-) |
| G125848 | NA | non-coding | upstream | 16262 | 8060380 ~ 8060675 (-) |
| G126089 | NA | non-coding | upstream | 26664 | 8070782 ~ 8071167 (-) |
| G126110 | NA | non-coding | upstream | 37142 | 8081260 ~ 8081501 (-) |
| G126133 | NA | non-coding | upstream | 93920 | 8138038 ~ 8138448 (-) |
| G125798 | NA | other | downstream | 67861 | 7975667 ~ 7976047 (-) |
| G125457 | NA | other | downstream | 685804 | 7357237 ~ 7358104 (-) |
| CI01000024_03938368_03941795 | NA | other | downstream | 4101984 | 3938315 ~ 3941924 (-) |
| G123233 | NA | other | downstream | 5488872 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 7217057 | 824968 ~ 838550 (-) |
