Gene
RNA
| Item | Value |
|---|---|
| gene id | G126110 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 8081260 ~ 8081501 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143209 | True | 242 | lncRNA | 0.36 | 1 | 8081260 | 8081501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_07858315_07901816 | NA | coding | downstream | 179322 | 7858157 ~ 7901938 (-) |
| CI01000024_07847824_07855700 | NA | coding | downstream | 224919 | 7847573 ~ 7856341 (-) |
| CI01000024_07697986_07832289 | PTPRFB, PTPRF, PTPRFA | coding | downstream | 248971 | 7697986 ~ 7832289 (-) |
| CI01000024_07672858_07695341 | KDM4AB, KDM4A | coding | downstream | 385435 | 7672593 ~ 7695825 (-) |
| CI01000024_07604312_07619531 | ST3GAL3, ST3GAL3A, ST3GAL3B | coding | downstream | 461729 | 7604312 ~ 7619531 (-) |
| CI01000024_08161023_08259943 | SZT2 | coding | upstream | 78789 | 8160290 ~ 8259943 (-) |
| CI01000024_08260814_08264845 | SZT2 | coding | upstream | 179313 | 8260814 ~ 8264845 (-) |
| CI01000024_08292984_08380058 | PBX1.S, PBX1A, PBX1B, PBX1 | coding | upstream | 211483 | 8292984 ~ 8380058 (-) |
| CI01000024_08450580_08455758 | NA | coding | upstream | 369061 | 8450562 ~ 8457764 (-) |
| CI01000024_08460577_08479254 | NA | coding | upstream | 378968 | 8460469 ~ 8479690 (-) |
| G126089 | NA | non-coding | downstream | 10093 | 8070782 ~ 8071167 (-) |
| G125848 | NA | non-coding | downstream | 20585 | 8060380 ~ 8060675 (-) |
| G125846 | NA | non-coding | downstream | 22136 | 8058882 ~ 8059124 (-) |
| G125835 | NA | non-coding | downstream | 37142 | 8043908 ~ 8044118 (-) |
| G125827 | NA | non-coding | downstream | 46626 | 8034309 ~ 8034634 (-) |
| G126133 | NA | non-coding | upstream | 56537 | 8138038 ~ 8138448 (-) |
| G126096 | NA | non-coding | upstream | 256649 | 8338150 ~ 8352309 (-) |
| G126097 | NA | non-coding | upstream | 271156 | 8352657 ~ 8367792 (-) |
| G126163 | NA | non-coding | upstream | 309873 | 8391374 ~ 8391577 (-) |
| G126172 | NA | non-coding | upstream | 324021 | 8405522 ~ 8405988 (-) |
| G125798 | NA | other | downstream | 105213 | 7975667 ~ 7976047 (-) |
| G125457 | NA | other | downstream | 723156 | 7357237 ~ 7358104 (-) |
| CI01000024_03938368_03941795 | NA | other | downstream | 4139336 | 3938315 ~ 3941924 (-) |
| G123233 | NA | other | downstream | 5526224 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 7254409 | 824968 ~ 838550 (-) |
