CI01000026_09666763_09669325


Basic Information

Item Value
gene id CI01000026_09666763_09669325
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9666680 ~ 9669702 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_09666763_09669325.mRNA
GTATAAATAATGCTGAACATTACTTATAGTTATATAAGCACAGTTCAGTTCCTGTTAGGTCAAGCATATTGAAATTGTGCGAGATGACAAATTTCTCAGACTCAGTAGTTGCTGGTTGCAAGTCAAAAGTCTGTAATAACCTAAATGAACTCGGCTGCAGCCTCTCCCTCTTCATTCACAAAAAGCTGGTTTTGGGCATATCTCATTTCAGCCAAGCATGCTGCACCAGCATAGATTATGACAAGACCAGGCCTTTTCCTACCTCCCTGCCTGCTGCCTGGCCCTATGCAGTCATACAAGGGTTTTACATAAGCAGAGCTGCTATTCTGGGCTGTACTGACAGCAGATGTGATCCTAAATTTGAGCGCTGTGCTCAGTGAGCTTTCCCAGGCAGCTGGGAGAGAGATTAATAGAGCTAATGTAGCAGCACCAGATCCAAATGTGCATCGTAATGTAGCTCAGGCTAAAAAAAAAATACCTACTGCCACACTGAAGACTTGAAGTAGACTGTTTAAGGGGGATGAGATACATGGGATATAAGGAACATGAGAAGGGATTTCAGCATGTGATGGTCAGTGCTACTTAGGACACATACAGTATAAGGTCCCCTTTCTGACAGACACGGTGTTGTTTTACTAGTTATCAAGTTATCAAGGCTCGCCATACAGGGCATGTTGTCCTGAACAGATGTAAGGGCTTCAGCTAAAACAATATTGAATATATTTTGGCATTAAATGGCAGATCCACTGACTCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_09666763_09669325.mRNA True 757 mRNA 0.43 3 9666680 9669702

Neighbor

gene id symbol gene type direction distance location
CI01000026_09602263_09635635 TOX3 coding upstream 29686 9601643 ~ 9636994 (+)
CI01000026_09365911_09428712 CHD9 coding upstream 237604 9364907 ~ 9429076 (+)
CI01000026_09339450_09352303 AKTIP coding upstream 313503 9339450 ~ 9353177 (+)
CI01000026_09175446_09178464 NA coding upstream 488192 9175249 ~ 9178488 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding upstream 587342 9075216 ~ 9079338 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding downstream 230491 9900193 ~ 9907237 (+)
CI01000026_09915483_09917692 NA coding downstream 245743 9915445 ~ 9917919 (+)
CI01000026_10124232_10124468 NA coding downstream 454214 10123916 ~ 10125835 (+)
CI01000026_10136110_10149386 BRD7 coding downstream 466294 10135996 ~ 10149466 (+)
CI01000026_10200749_10202405 NA coding downstream 528891 10198593 ~ 10202514 (+)
G132667 NA non-coding upstream 97576 9568739 ~ 9569160 (+)
G132664 NA non-coding upstream 103695 9562777 ~ 9562985 (+)
G132659 NA non-coding upstream 114126 9552354 ~ 9552554 (+)
G132658 NA non-coding upstream 114606 9551715 ~ 9552074 (+)
G132656 NA non-coding upstream 115217 9550864 ~ 9551463 (+)
G132783 NA non-coding downstream 3960 9673662 ~ 9673926 (+)
G132867 NA non-coding downstream 117630 9787332 ~ 9787570 (+)
G132868 NA non-coding downstream 118154 9787856 ~ 9788078 (+)
G132879 NA non-coding downstream 133640 9803342 ~ 9803600 (+)
G132888 NA non-coding downstream 147984 9817686 ~ 9817965 (+)
G131077 NA other upstream 1159893 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1367266 8297857 ~ 8307629 (+)
G130967 NA other upstream 1477607 8188374 ~ 8189073 (+)
G130552 NA other upstream 2570028 7095053 ~ 7096652 (+)
G133192 NA other downstream 490117 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1401066 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1575231 11241496 ~ 11246204 (+)
G133542 NA other downstream 1806415 11476117 ~ 11477544 (+)

Expression


Co-expression Network