CI01000026_09915483_09917692


Basic Information

Item Value
gene id CI01000026_09915483_09917692
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9915445 ~ 9917919 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_09915483_09917692.mRNA
ATTTAAAACACCTGAAGCTTTGTGTGTTACTAATCGAGATGCAGTGGTCCTCAAGGCGACTGATCCAGATATGTTTTTGTGAAGAGCTTGATCCAAGTCTTGCTAAATTGGTTTGTGACTCATTCAGGATTGCAAGACTTTACGGTGCTATACTTCTGACCAGTCGCTTCCATTCAGCAGCAGTGCGGACACAGGACAGGTGTCATCTTCCCTGGCCATGGAGGAAGGTAGGAGCCAGATTGCGTTCTGAGACGGATCAGTCCCTTGTTGGCAGTAATTGGGTGCTGGCCTGGGTTAATGCGCTCACCACCATTAATGAAAACGTTGAGCTGTAAGTGGGACTGTATGAAACGGAGAACGTTCTCAATAGCCTCCAAACAGTCACCAGGGTCCATTCTGCAGCAGGCCAGGCCCAGCTTTTATTGGAGTGAAGTGAAGCATGAATTCTGTGAGGGAAAGATGGAGCCAGTTATATTCAAAGCTGTAAGCCAGACGGTTGAATGAAATAACCCTTTTTTTTTTTTTTTTAAGATAAAGACAATCTCTTGGGTAAGTCAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_09915483_09917692.mRNA True 562 mRNA 0.45 3 9915445 9917919

Neighbor

gene id symbol gene type direction distance location
CI01000026_09900193_09906874 SALL1A, SALL1 coding upstream 8208 9900193 ~ 9907237 (+)
CI01000026_09666763_09669325 NA coding upstream 245743 9666680 ~ 9669702 (+)
CI01000026_09602263_09635635 TOX3 coding upstream 278451 9601643 ~ 9636994 (+)
CI01000026_09365911_09428712 CHD9 coding upstream 486369 9364907 ~ 9429076 (+)
CI01000026_09339450_09352303 AKTIP coding upstream 562268 9339450 ~ 9353177 (+)
CI01000026_10124232_10124468 NA coding downstream 205997 10123916 ~ 10125835 (+)
CI01000026_10136110_10149386 BRD7 coding downstream 218077 10135996 ~ 10149466 (+)
CI01000026_10200749_10202405 NA coding downstream 280674 10198593 ~ 10202514 (+)
CI01000026_10265012_10268157 NA coding downstream 347026 10264945 ~ 10268548 (+)
CI01000026_10315650_10317985 NA coding downstream 397160 10315079 ~ 10317990 (+)
G132916 NA non-coding upstream 65742 9849234 ~ 9849703 (+)
G132908 NA non-coding upstream 76181 9839015 ~ 9839264 (+)
G132888 NA non-coding upstream 97480 9817686 ~ 9817965 (+)
G132879 NA non-coding upstream 111845 9803342 ~ 9803600 (+)
G132868 NA non-coding upstream 127367 9787856 ~ 9788078 (+)
G132800 NA non-coding downstream 1467 9919386 ~ 9920088 (+)
G132953 NA non-coding downstream 12566 9930485 ~ 9930713 (+)
G132951 NA non-coding downstream 60554 9978473 ~ 9979099 (+)
G132950 NA non-coding downstream 65108 9983027 ~ 9983920 (+)
G132949 NA non-coding downstream 70220 9988139 ~ 9988663 (+)
G132667 NA other upstream 346285 9568739 ~ 9569160 (+)
G131077 NA other upstream 1408658 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1616031 8297857 ~ 8307629 (+)
G130967 NA other upstream 1726372 8188374 ~ 8189073 (+)
G130552 NA other upstream 2818793 7095053 ~ 7096652 (+)
G133192 NA other downstream 241900 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1152849 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1327014 11241496 ~ 11246204 (+)
G133542 NA other downstream 1558198 11476117 ~ 11477544 (+)

Expression


Co-expression Network