CI01000026_11747661_11754397


Basic Information

Item Value
gene id CI01000026_11747661_11754397
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11746800 ~ 11755219 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_11747661_11754397.mRNA
ATATTTTGTTAGTTATATTAGGTAATCGAGCAACGAGCTTCATTCTGCACAGTTTTAACGCATTTAATATCCATTTTCCTCATCCTTTCATAAGAAAATAACAAAAGAAGATACTTGGAGGTCTGATGACTTAAAAGTGCACATTCAGGTAATCTGCAGTTTGTTTGTGTGTAAGAAAAAGACAAGGTTTAAAAGCACAACCCGTAAAAATGTCATTGTGTTGCTAGGCACACAATGAGGACAGCAGAAGAAAATCAAAACGTGAAGAGGAGCACAGGAAACACAGGAACGGAGAATCTCTGGATCGGCGACAAAGAGACCCTGATCAAGACGCAAGGAGAGAGAAAGAAAAACGGAGACACGGAGAAAGCGCAAGAGAGGAGAGTAAACACAGAGACCCAGACAGGGACAGAAACCAGGATATCAAGAGGGAAGACGTCAGGGAGGATAGATATAAAGAGAGGAGAGAGCGAGATAAGGCATTAGATTTCAACAGACACAGAGATAGAGATGGAGATGAAGAAGAAAAAAGACATGATCGAGGTGAGAAGGAAAACAGTGAAAGACGGAAGGATAGAGATAAAGACAGGGACATAGATATGTACAAACAGCGGGACAGGGTAACGGACAGGGAAAGAGAAAAAGATAGAGATAGGGATAGAAGGAGGTCTGAGAGAGATAGGGAAAGAAAAAGTGAATCGGATAGAAGGAAAGAGGAGAAAAGAGAAGGAGGAAAAGAAGAGAAGGAGAGAGACAAAGAAAGAGAACGAGAGAGAAGAGAAAGACACAGAGCAAGAGAAAGTGACCGAAATCGACGTGAATATGAGGAAAAACAGAGAGAAGGTGAAAGGCGAGAGAAACACAGTGAAAAAGAAAACTCTGGACACAAAGAAAGAGGTGACAAACACAAGTCACTCTCAAGAAGGTGAACGTCATCACCAGGAGTGGAAAGAGTCAAAGGATTATTTCCACGGCATCAAAGGTGGGGATAGGGAAAAGACCAGGGAGAGGGAAGAGAGAGACAGAAGGCGTGAAAGAAGGCACAAGGAGGTTTCAGACTACAAGAGTGAAAGGAGTGAAAGAGAGCGGAAACAAAAAGATCCATCAGGACATGAAATAAATGAAAGGATAATTAGAGACAAAGAGGTGGAGAATGAAGATACTGAAAAGGACAAACAATCAGGCAAAGATTATCATAATGATGATTATGATGAGGATTTTGAGAAAGACACTCTAACAGAAGTCAAACGCATGGCAAAATTATTGATTTTGTATCAGCAAAGCAGCGAGAGGAAGCGCAGTGAGGAACTTCTGCGTCTGATTGATTTAGACTTCTCCATCACCTTCTCTCTGCTGGACCTGCCTCCTGTCAATGAGTATGACATGTACATCAAGACCTTTGGAACAGCTGATACAAAACAGGCTTATGTGCAGTGCAATGAAGACAACACTGATCGAGATATACAAACAGAAGAAGTTGACATGACAGACAAATGGACACAACACCCACCAGAAGCAAAGGCAGTATGCGGAGGTCGTCAGGTGAGTCTGCTGCAGTTCTCTCAAGTCCAAAGACAGACTCTTCTGTCTGTTCATCCTCCTCCTCCCAAAACCAGTGCTGTTCAGCTTGACAGCGAGACGGTCATCTGTGTGTGGAACATCTGGGAGCCATCCAGACCCCAAAAAATTCTTCTTTATGAATCTGAGGTGAGGTGTTGTTGTTTCAGTCCTGGTAAAGTTACATTAGTGTTTGCTGGTACAGCAGTGGGTTCAGTGGTGGTATGGGATCTCAGAGAACATTCTGGCACTCATTGCAACTTGGTGGTTGGCAAAGAGGTGTGGACACTACGCTACCCGACCTTCTCTACGGATGCTGTACTTTCAGGGGTGGGTCATCTCTCTCCTGTGGTGTCTGTTGAACCTGTACTGGCAACTGCTGATACAAGTTCAAAGAGCACGCTAACTGCAGACATAGAAGAGTCTCTGGGACTGTCATTCCAGTTAGGATCTTTGGATGAAAATGGGGTGTTAACTCTCTGGGTTGTGGTCGAGCTGCCCAAAGGAAATGATTCTGGATCTCAAACAGACCTAGGTCTTAGGCCTGGCGGTAAAGTTAAATTACTCCACAGCTCCTCTCTACAGACCACTGAGAGATTACCTCAAGACATTATAATGGGATTTGGATCTCCTGTGAGCCTTCAGTTAAAGTTCCTCCCTTCTGACTCGAATCACTACTTCATTGGTACTAACATGGGTCTGGTTAGACATGGTACGAGGCATAGCTTGAAAGTTCTTCCAAAGTTCTACAGATCACAGTTTGATAGCTGTAGACCAGTGGAGGTCACAACACTTGACTTCAGTCCATTTGGAGAACCCCTTTTCCTGGTTGGCTGCAGTGATGGAACAGTTCGATTACACTCTGTCCTGAGAGAAGATCCGTTGATGGAGTGGTCTGAATGTTCCAGTGGCGCTCCCATTCTGTCAGTGCAGTGGTCTCAGACACGGCCAGCTGTATTCTGTGTTCTGGATGCTGCCTCTGATCTTCTCATCTGGGACCTGACAGAGAAGGATTATGTGCCAGTCATCACTGAGAATATACACAATGACCGGGTAACAGCCATGGCAGTGTTTGGTGATCCAGCCAAACAGAACACATTTTCTGGCGTTGCGCTCGCCAAGCAGTCTGGAAAGGTGGAGATTCAGTATTTCAAGAAGTCACTTACAGTGCCTAGCGCCTCTGACAAAGAAAAACTTAATTCTGTTTTACATGATGCTTTTTTGATATGAGATCTGAGCCCAGATTAATATCCAGTTAAATTGATAATATGCAAATAACAGAGGAAAACACAAAGAGGGTTTAGAGAGAGTCATAATGAGCCCCCAAAAAGTATGGACAGACCTAGTGAATTATATTTCCTTGTTACATCAGTAATGTATCTAAAGCTACATTGATTGTGACTATAACAGCATGAACTGTAGAGGATGAGAAATGGTTGTTTACTACAGTCACAGTGGCTACCCTTTTTGGTGTATAAAAATAAGAAATGAACTTCCCTGGCTTAAAATTCATTACATCTGAAACTTTGCTGATGTTGGCTGGAACATAATGGTTTTGTTGCTGTAAGCAGCATTTTGTAAAGTTAGATCAAATGCTAAAGGAAGCACATAAAAATGAGCTTTCCGTTCCTCAGGGATATAAATACTTTATATCCTTTTTGTATTATTTTACAATATATGTACAAATGAATATTTACACTGAGTAGCATTTGGAATATATTTCTTATTTATGGTCCTTATCATTTATTCACTATCAGTGCTATCATACTGTTATTATTAATGGATTTTTTTTATTAAAAGACGATTGTAGGTGGACTGGGGTTTTTCTTCGTTCTTTGCGTATGTTGTTATTGCTTTATTTACTATATTAGCAACTGTACACCCTCACTATGGATTTTTGTTATCTTTTGGAAGGGTATCAGCACACGTACTTGTGTTTCAATGTTATCATTCTCACAGAGGGAAACGAACAACATTTATAATCCGTCTGTGAGGCCAACTGCTTTTGACTGTTCTGTCAAGTATTATAATTTTTCACCGTTACCATGGTTTTAAGATATACTCAGACGTTTGTTGTTTTTACATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_11747661_11754397.mRNA True 3648 mRNA 0.42 15 11746800 11755219

Neighbor

gene id symbol gene type direction distance location
CI01000026_11745584_11746257 NA coding downstream 92 11744948 ~ 11746708 (-)
CI01000026_11682328_11694593 SHRPRBCK1R, SHARPIN coding downstream 51800 11681667 ~ 11695000 (-)
CI01000026_11488673_11493122 GRPEL1 coding downstream 253678 11487951 ~ 11493122 (-)
CI01000026_11481190_11482991 NA coding downstream 263809 11481081 ~ 11482991 (-)
CI01000026_11367029_11386064 NA coding downstream 360736 11366815 ~ 11386064 (-)
CI01000026_12008640_12024213 DNAJB6B coding upstream 253336 12008555 ~ 12024213 (-)
CI01000026_12036990_12067506 UBE3C coding upstream 281429 12036648 ~ 12068858 (-)
CI01000026_12079761_12087407 NOM1 coding upstream 324188 12079407 ~ 12088424 (-)
CI01000026_12132260_12141706 RNF32 coding upstream 376722 12131941 ~ 12141706 (-)
CI01000026_12220025_12255410 RBM33 coding upstream 464806 12220025 ~ 12255410 (-)
G134074 NA non-coding downstream 42310 11704050 ~ 11704490 (-)
G134031 NA non-coding downstream 94688 11548983 ~ 11652112 (-)
G134006 NA non-coding downstream 295459 11451126 ~ 11451341 (-)
G134002 NA non-coding downstream 320783 11425792 ~ 11426017 (-)
G134001 NA non-coding downstream 321490 11425000 ~ 11425310 (-)
G134413 NA non-coding upstream 109751 11864970 ~ 11956490 (-)
G134486 NA non-coding upstream 235321 11990540 ~ 11990883 (-)
G134487 NA non-coding upstream 237907 11993126 ~ 11993329 (-)
G134489 NA non-coding upstream 239400 11994619 ~ 11995367 (-)
G134490 NA non-coding upstream 240678 11995897 ~ 11996175 (-)
G133802 NA other downstream 439619 11301915 ~ 11307181 (-)
G133790 NA other downstream 909195 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 956646 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 1397843 10347746 ~ 10351783 (-)
G132721 NA other downstream 2196156 9550030 ~ 9550644 (-)
G136110 NA other upstream 2799698 14554917 ~ 14555436 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 5001510 16756729 ~ 16761341 (-)
G137667 NA other upstream 5051145 16806364 ~ 16808372 (-)
G137914 NA other upstream 5228032 16983251 ~ 16984352 (-)
G137967 NA other upstream 5313129 17068348 ~ 17069433 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location