G132667


Basic Information

Item Value
gene id G132667
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9568739 ~ 9569160 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150880
CCAAATTCAGTATCTCAGAAAATTAGAATATTGTGAAAAGGTTCAATATTGAAGACCTGGTGCCACACTCTATAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTCTCTCAGTCTAGTTCTGTAGGCTACACAACCATGGGGAAGACTGCTGACTTGACAGTTGTCCAAAAGACGACCATTGACACCTTGCACAAGGAGGGCAAGACGCGAAAGGTCATTGCAAAAGAGGCTGGCTGTTCACAGAGCTCTGTGTCCAAGCACATTAATAGAGAGACGAAGGGAAGGAAAAGATATGGTAGAAAAAAGTGTACAAGCAATAGGGATAACCGCACACTGGAGAGGATTGTGAAAC
>TU150881
CCAAATTCAGTATCTCAGAAAATTAGAATATTGTGAAAAGGTTCAATATTGAAGACCTGGTGCCACACTCTATAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTCTCTCAGTCTAGTTCTGTAGGCTACACAACCATGGGGAAGACTGCTGACTTGACAGTTGTCCAAAAGACGACCATTGACACCTTGCACAAGGAGGGCAAGACGCGAAAGGTCATTGCAAAAGAGGCTGGCTGTTCACAGAGCTCTGTGTCCAAGCACATTAATAGAGAGACGAAGGGAAGGAAAAGATATGGTAGAAAAAAGTGTACAAGCAATAGGGATAACCGCACACTGGAGAGGATTGTGAAACAAAACCCATTCAAAAATGTGGGGGAGATTCACAAAGAGTGGACTGCAGCTGGAGTC
>TU150882
CCAAATTCAGTATCTCAGAAAATTAGAATATTGTGAAAAGGTTCAATATTGAAGACCTGGTGCCACACTCTATAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTCTCTCAGTCTAGTTCTGTAGGCTACACAACCATGGGGAAGACTGCTGACTTGACAGTTGTCCAAAAGACGACCATTGACACCTTGCACAAGGAGGGCAAGACGCGAAAGGTCATTGCAAAAGAGGCTGGCTGTTCACAGAGCTCTGTGTCCAAGCACATTAATAGAGAGACGAAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150880 False 366 lncRNA 0.43 1 9568739 9569104
TU150881 False 422 TUCP 0.43 1 9568739 9569160
TU150882 True 297 lncRNA 0.43 1 9568739 9569035

Neighbor

gene id symbol gene type direction distance location
CI01000026_09365911_09428712 CHD9 coding upstream 139663 9364907 ~ 9429076 (+)
CI01000026_09339450_09352303 AKTIP coding upstream 215562 9339450 ~ 9353177 (+)
CI01000026_09175446_09178464 NA coding upstream 390251 9175249 ~ 9178488 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding upstream 489401 9075216 ~ 9079338 (+)
CI01000026_08950735_08960908 NA coding upstream 607593 8950663 ~ 8961146 (+)
CI01000026_09602263_09635635 TOX3 coding downstream 32539 9601643 ~ 9636994 (+)
CI01000026_09666763_09669325 NA coding downstream 97576 9666680 ~ 9669702 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding downstream 331089 9900193 ~ 9907237 (+)
CI01000026_09915483_09917692 NA coding downstream 346341 9915445 ~ 9917919 (+)
CI01000026_10124232_10124468 NA coding downstream 554812 10123916 ~ 10125835 (+)
G132664 NA non-coding upstream 5754 9562777 ~ 9562985 (+)
G132659 NA non-coding upstream 16185 9552354 ~ 9552554 (+)
G132658 NA non-coding upstream 16665 9551715 ~ 9552074 (+)
G132656 NA non-coding upstream 17276 9550864 ~ 9551463 (+)
G132657 NA non-coding upstream 18079 9550152 ~ 9550660 (+)
G132783 NA non-coding downstream 104558 9673662 ~ 9673926 (+)
G132867 NA non-coding downstream 218228 9787332 ~ 9787570 (+)
G132868 NA non-coding downstream 218752 9787856 ~ 9788078 (+)
G132879 NA non-coding downstream 234238 9803342 ~ 9803600 (+)
G132888 NA non-coding downstream 248582 9817686 ~ 9817965 (+)
G131077 NA other upstream 1061952 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1269325 8297857 ~ 8307629 (+)
G130967 NA other upstream 1379666 8188374 ~ 8189073 (+)
G130552 NA other upstream 2472087 7095053 ~ 7096652 (+)
G128757 NA other upstream 3241954 6326196 ~ 6326785 (+)
G133192 NA other downstream 590715 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1501664 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1675829 11241496 ~ 11246204 (+)
G133542 NA other downstream 1907013 11476117 ~ 11477544 (+)

Expression


Co-expression Network