G135979


Basic Information

Item Value
gene id G135979
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 14555132 ~ 14555422 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU154558
CTCTAATTCATCCCAAAGGTGTTCTATCGGGTTGAGGTCAGGACTCTGTGCAGGCCAGTCAAGTTCCTCCACACCAAACTCGCTCATCCATGTCTTTATGGACCTTGCTTTGTGCACTGGTGCGCAGTCATGTTGGAACAGGAAGGGGCCATCCCCAAACTGTTCCCACAAAGTTGGGAGCATGAAATTGTCCAAAATGTTTTGGTATGCTGAAGCATTAAGAGTTCCTTTCACTGGAACTAAGGGGCCAAGCCCAACCCCTGAAAAACAACCCCACATCATAATCCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154558 True 291 lncRNA 0.49 1 14555132 14555422

Neighbor

gene id symbol gene type direction distance location
CI01000026_14530926_14542878 NA coding upstream 11508 14528904 ~ 14543624 (+)
CI01000026_14473444_14517944 NA coding upstream 37000 14471557 ~ 14518132 (+)
CI01000026_14282383_14282886 NA coding upstream 272063 14282145 ~ 14283069 (+)
CI01000026_14205243_14205597 NA coding upstream 348869 14202436 ~ 14206263 (+)
CI01000026_14178928_14180619 NA coding upstream 374400 14178250 ~ 14180732 (+)
CI01000026_14579105_14590405 NA coding downstream 23683 14579105 ~ 14591232 (+)
CI01000026_14607563_14660403 BEAN1 coding downstream 52141 14607563 ~ 14660403 (+)
CI01000026_14677273_14679619 NA coding downstream 121529 14676951 ~ 14679772 (+)
CI01000026_14685877_14686783 CKLF coding downstream 130424 14685846 ~ 14687092 (+)
CI01000026_14690064_14690693 CMTM3 coding downstream 134642 14690064 ~ 14690693 (+)
G135978 NA non-coding upstream 30 14554896 ~ 14555102 (+)
G135933 NA non-coding upstream 67008 14487925 ~ 14488124 (+)
G135932 NA non-coding upstream 70296 14484580 ~ 14484836 (+)
G135931 NA non-coding upstream 71428 14483424 ~ 14483704 (+)
G136012 NA non-coding downstream 182718 14738140 ~ 14743008 (+)
G136034 NA non-coding downstream 217850 14773272 ~ 14773507 (+)
G136036 NA non-coding downstream 221265 14776687 ~ 14776962 (+)
G136037 NA non-coding downstream 221823 14777245 ~ 14777525 (+)
G136038 NA non-coding downstream 222204 14777626 ~ 14777974 (+)
G133542 NA other upstream 3078225 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 3300059 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 3476052 11075784 ~ 11079080 (+)
G133192 NA other upstream 4393171 10159819 ~ 10161961 (+)
G132667 NA other upstream 4985972 9568739 ~ 9569160 (+)

Expression


Co-expression Network