XLOC_008508


Basic Information

Item Value
gene id XLOC_008508
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24179932 ~ 24205981 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018776
GTTGGCAAAGCAGCAGAAACAAACGTACATTGCGTCTAaaatataacttattattaatttgttcaaCTACAGTATATCTTCTGCACGTGCTATTCAAGATAAAAACACCACCTTCGTGATATATGGGACAACGTCAACGCACACTCGATGATCATTTTTGATTCTGCAAAATTGGTGAGGCGACTTGTGATCGGTCTTTTTGAATCAGTTCAACCGATTCATTAAAAAGAACAAGAAAAGTCAAGAACGAAGCACAGCTTGAAAAATAATGTCGTCGTCAGTTAAGTTTCTCTCGTGGACATCCGGAAAACCTAAGCTAAGCTTATTGTCGAGTTTGCCTGAAAGAAATGCATCAATTTTCTACAGACTTTTATGCATGCTCTAGACCCATGTGAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018776 True 397 lncRNA 0.38 2 24179932 24205981

Neighbor

gene id symbol gene type direction distance location
XLOC_008507 NA coding upstream 17832 24149968 ~ 24162100 (+)
XLOC_008506 NA coding upstream 47095 24132554 ~ 24132837 (+)
XLOC_008504 myo18ab coding upstream 59011 23947932 ~ 24120921 (+)
XLOC_008505 NA coding upstream 174649 23999569 ~ 24005283 (+)
XLOC_008503 si:ch1073-145m9.1 coding upstream 261449 23911655 ~ 23918483 (+)
XLOC_008510 sez6b coding downstream 6866 24212847 ~ 24544680 (+)
XLOC_008511 NA coding downstream 106575 24312556 ~ 24313122 (+)
XLOC_008512 phf12b coding downstream 343073 24549054 ~ 24563042 (+)
XLOC_008513 dhrs13b.1 coding downstream 357523 24563504 ~ 24569062 (+)
XLOC_008514 dhrs13b.1 coding downstream 366945 24572926 ~ 24601091 (+)
XLOC_008463 BX663520.1 misc upstream 2927650 21252191 ~ 21252282 (+)
XLOC_008496 NA non-coding upstream 674275 23467984 ~ 23505657 (+)
XLOC_008494 CR847979.1 non-coding upstream 801744 23378071 ~ 23378188 (+)
XLOC_008515 NA non-coding downstream 410589 24616570 ~ 24618644 (+)
XLOC_008522 NA non-coding downstream 635310 24841291 ~ 24844913 (+)
XLOC_008523 CR942805.1 non-coding downstream 756155 24962136 ~ 24962252 (+)
XLOC_008524 NA non-coding downstream 801574 25007555 ~ 25053314 (+)

Expression


Co-expression Network