CI01000027_00645077_00650763 (SLC25A32B, SLC25A32)


Basic Information

Item Value
gene id CI01000027_00645077_00650763
gene name SLC25A32B, SLC25A32
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 644241 ~ 651285 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_00645077_00650763.mRNA
ACAATATATTTTAAAATTAATGGCTCCTAATGTAACTCAGAGGACAACAACATTAAAGGAAAAAATATTATTATTATAAGGAAAAAAAAAAAAAGAAAAATAATACACAAAATATGGTACATAAATAATTACTATACTGTCAGCTGCTATTACACACACACATATATATATATATATATATATATATATATATATAATTTTCTTATTTCCGCTACAGTACGTTCCCGTCAAAGACTCTTGTTTTGACATTCAATGTTGCGCATGCGCAGTTTGTGTTGTGTGAAGCGCCATGTTCCAGTTTCAGCATGTTTCCAAATCATCGCTGCTGTCACTGTACATGATCTGACATTTACCGGTAAGGTCATGGACATCGTTTATTTTTACTGAAACTTTGGCTTTTGCCAGCTGTGATAGCAAACCCCACAAAGTTCTTTCATAGTAGAACTGGTATAAAACGATTGAGTAATATGTTGAAGTTAAAGTGGGTGATTTTGTGTGTTGAACCACAGCACGGGAGCGGTCATGAGCCCCAGTCCCAGCCCGGGCTCCCCTGTCCCGCTGACCCTCTCCCTGCAGAGGCTCTTCAGCCACGTGAAGATCGAGAATCTAATAGCAGGGCTCAGTGGAGGGGTGGCGTCCACACTAGTGCTGCATCCCCTGGATCTGGTCAAAATTAGGTTTGCAGTGAGTGATGGGCTGGACGTGAGACCGAAATACAACGGCATTCTGCACTGCATGAAGAGCATCTGGCACCAGGAGGGTCTCCGGGGCCTTTATCAAGGCGTCACCCCCAATATCTGGGGTGCTGGAGCATCATGGGGGCTCTACTTTTTCTTTTACAATGCAATCAAAGCGTACACCAAAGAGGGCCGACAGACGGAGCTGAGCGCTGCTGAACACCTGCTGTCCGCCGCCGGAGCAGGGGCGATGACGCTTTGCCTGACCAATCCAATCTGGGTCACCAAAACCCGCCTCGTTCTGCAGTACAGCGCCGATCCGTCTGGGAAGCAGTACAGGGGCATGATGGATGCGCTGGTGAAAATCTACCGGCACGAAGGGATCGCGGGACTCTATCGGGGGTTTGTTCCGGGTTTGTTTGGAACCTCCCATGGTGCACTGCAGTTCATGGCGTACGAAGAGCTGAAGAGAGAATATAACAAATACAGAAAGATGCAATCAGATGCTAAACTGAAACTGCTGAAACTACTGGTGAATATGGACATGAGGGATTGATTATGTGACTTTTTTTTCTTTTCTTTTTTTTAAATGGATGTAAGTTATATTCTCTTAAAGGCTGTTTGTTTTATCTAATTAAA
>TU158259
AGAAACGAGGGCCTGTTGGGGTTCTACAAAGGCATGGTGCCCAACCTGATCCGCGTCACTCCGGCCTGCTGCATAACATTTGTGGTCTATGAGAATGTGTCCCGCTTCCTCCTGGACCGGCACCAGTGAACTGAGAACAGGTGCGACTGCGACCAAACCGTCTGCCATGGAGCAGAGCCGGACCTGGGATGGGTCGTCCCGTCAGCGACAGTGTTTCGCAGCTACGGACGAGTCATAATTGTGAATAGAGAGAAATAAAACAACTGGAAAACTGAACTGCATGATGTCACGGAGTTCAAAGTGTAATTTGTGTCGTCACTGCTTCAGAAACTGCTGAAACTACTGGTGAATATGGACATGAGGGATTGATTATGTGACTTTTTTTTCTTTTCTTTTTTTTAAATGGATGTAAGTTATATTCTCTTAAAGGCTGTTTGTTTTATCTAATTAAAAAGTGTAAAAATCAAAACAAGGTTTACACTTTTAATGAGGAGATAATGATGAATTGTGGTAACTACTATAGGGCTGGGCAATGTGTGAAATATCCATGACATATTTGTAAAGAATTTGCTGGCAATATAAAATTAAACAACATAATCACAATGATTTTAAAGGGACTATTAGCGACACCGGTGGCCGTTAAGTGAACTTGCCAGCGACTTGCAGACGTAACGTTCAAGAGACTACACGTGATTAAATGGAACGATATACTAACAGCGAAGTTCTTTTTCGTCCTTTGCTTAGAAGTAAAAAGAAGTTGGAAATACCTTTGCAGCGATTATACTTTTAAGGAACTGCTGAGAGCGATGTTTAGATGTAAATATGTGCTTTCCTCTCAATAACAAAATAAACACAACAAAAATGACAGCGGTGAGAAAGCGATTCAACATCATGTCAACAGATGAGGAACCGGATCTTCCAACGGCCACTGCAGTGACACGATGACTTTACCAATTGGTGATTGGCTCTTATTTAAAAGGCGGGACTTATTCCGCCATATTGTGCGTTATACTTTATCCCATTCATAATAATACACCGAGTGCACCTTCTTTCTATAAAGCCTTTGTTACAGTACAGAGCGGCTCTTTCGGCATTATCCTGACTAAGCATTCGTGTGCTTTGAACCTAAGAGAGGCTCTCGGGAGCGCGCGTAACCGTCACATCGTTTGAATTTTCCCGGCAAAACCGGACCGCATCCTGCACAT

Function

symbol description
slc25a32b Predicted to enable FAD transmembrane transporter activity and folic acid transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in anterior neural tube and optic cup. Orthologous to human SLC25A32 (solute carrier family 25 member 32).
slc25a32 Enables folic acid transmembrane transporter activity. Involved in folate import into mitochondrion and mitochondrial FAD transmembrane transport. Located in mitochondrion.

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K15115 SLC25A32, MFT; solute carrier family 25 (mitochondrial folate transporter), member 32

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_00645077_00650763.mRNA False 1316 mRNA 0.44 6 644994 651285
TU158259 True 1205 lncRNA 0.42 1 644241 645445

Neighbor

gene id symbol gene type direction distance location
CI01000027_00332200_00343377 NA coding downstream 300955 331982 ~ 344039 (-)
CI01000027_00178291_00179467 EXT1B, EXT1A, EXT1, EXTL1 coding downstream 465527 178289 ~ 179471 (-)
CI01000027_00137910_00141799 NA coding downstream 501717 137292 ~ 144599 (-)
CI01000027_00131884_00132650 NA coding downstream 512344 131395 ~ 132650 (-)
CI01000027_00108990_00118237 NA coding downstream 526586 108119 ~ 118408 (-)
CI01000027_00701871_00719591 COL28A1B coding upstream 50481 701766 ~ 719591 (-)
CI01000027_00742700_00758723 COL28A1B coding upstream 91346 742631 ~ 758723 (-)
CI01000027_00798826_00806532 ICA1 coding upstream 147401 798686 ~ 806532 (-)
CI01000027_00808322_00809068 NA coding upstream 156783 808068 ~ 809068 (-)
CI01000027_00823197_00901936 THSD7AA, THSD7A coding upstream 170940 822225 ~ 901936 (-)
G139294 NA non-coding downstream 21867 620674 ~ 623127 (-)
G139166 NA non-coding downstream 31359 261400 ~ 613635 (-)
G139220 NA non-coding downstream 135333 487244 ~ 509661 (-)
G139228 NA non-coding downstream 135537 508400 ~ 509457 (-)
G139219 NA non-coding downstream 167636 474446 ~ 477358 (-)
G139354 NA non-coding upstream 333205 984490 ~ 984744 (-)
G139359 NA non-coding upstream 353884 1005169 ~ 1005411 (-)
G139360 NA non-coding upstream 355909 1007194 ~ 1007422 (-)
G139364 NA non-coding upstream 376984 1028269 ~ 1029875 (-)
G139117 NA other downstream 407415 234212 ~ 237579 (-)
CI01000027_01241417_01245177 NA other upstream 593350 1240478 ~ 1246267 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other upstream 650749 1302034 ~ 1321178 (-)
CI01000027_02119227_02124423 NA other upstream 1470845 2119131 ~ 2125142 (-)
CI01000027_02226447_02227499 NA other upstream 1575340 2225781 ~ 2227499 (-)
G140118 NA other upstream 2850249 3509352 ~ 3584679 (-)

Expression


Co-expression Network