CI01000027_06951132_06956691 (GLIPR2, GLIPR2L)


Basic Information

Item Value
gene id CI01000027_06951132_06956691
gene name GLIPR2, GLIPR2L
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6951132 ~ 6957767 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_06951132_06956691.mRNA
TCCTGCCCAAATTCACAACCAGCCGCCTGTCCTTGAGCACTTCACCAGCTCAAAGGCCTTCCAGAAAGAATCTTCCTATGGAAACTTCTGCTTCACTTTTTCATTTAAGGAGCTTCTCTGGCACTATGGTGAGCAGTTCGGTGGTGGCCAAAGTCCAGTCCTGCGTGTTTATGAGACTATGCTCTACAAAAAAGAGATTCAATATACGGTTGTAGTGCATCCTCGTTACGTAAATATTTATGACCATTATCCTCGACTTCCAAATCATGGTGATGGTGTTTGTGGATACAGTGGTGGGGCCATGTGGTGGCGCTGTCAATCCCCCGCTGAAGCTTACAAGAATGAGCTTGAGCTGGCAGGGACTGTGACAGTGAGGGAACTCTACAAGCAGGAGCTTCGATTAGAGGAGTCTTCTTACCATGGGGAAGTCAGGCTTTTTTGTGAGGAGGTGCTGAAGACTCATAATGAGTACAGGAGGAAACATCAAGCTCCACCTTTAAAACTCAGCAGTAAACTGAGCCGTGAAGCGGCAAGATATGCTGAGAGCCTTGCTAGCACCAGGATTCTGAAGCACAGTGCTGAGTCTAGTAGAGGAAACTGTGGAGAAAATTTAGCGTGGGCATCTTATGATCAAACAGGTAAAGATGTGTCTGATCGCTGGTATAATGAAGTGAACCAGTACAACTTTAACCAGCCAGGATTCTCCTCTGCAACTGGTCACTTCACTGCAGTGGTGTGGAAAAGCTCAAAGAAACTCGGTGTGGGTAAAGCTGTGGCCTCAGATGGTTCTACCTTCGTAGTGGCACGTTATTTCCCTGCCGGCAACATTACCAATCAGGGCCACTTCCAGGCCAATGTCCTGCCCCCTAAAAGCTGATCCAAATGTAGCTGGACACAATGAGATCAAAGGGAAGGGAACAGAAAGAGGACAGGGAACAGCTGAAATTGGAGAGACTTTTACCTGGAGGACCAAACAGCGACTGTGCAGCGCAGGATTTGGTTGCCTTAGATATACAGGTCTTACTTGA
>TU160307
AAGAAGTGAACTGAAAGCTTGTTTGTAAGCTGTTTCAGGGCTTCCAGAGCATGAAAAATTAGATGTTACTGGGTTATACTGGAAAAACAGGAGAGAAAGAGGCAGAGAAAGAAACGGGTGGGGAAAAAGATTGAAGTATTGTAACAGCTGGCAGGGACTGTGACAGTGAGGGAACTCTACAAGCAGGAGCTTCGATTAGAGGAGTCTTCTTACCATGGGGAAGTCAGCCTCCAGGCTTTTTTGTGAGGAGGTGCTGAAGACTCATAATGAGTACAGGAGGAAACATCAAGCTCCACCTTTAAAACTCAGCAGTAAACTGAGCCGTGAAGCGGCAAGATATGCTGAGAGCCTTGCTAGCACCAGGATTCTGAAGCACAGTGCTGAGTCTAGTAGAGGAAACTGTGGAGAAAATTTAGCGTGGGCATCTTATGATCAAACAGGTAAAGATGTGTCTGATCGCTGGTATAATGAAGTGAACCAGTACAACTTTAACCAGCCAGGATTCTCCTCTGCAACTGGTCACTTCACTGCAGTGGTGTGGAAAAGCTCAAAGAAACTCGGTGTGGGTAAAGCTGTGGCCTCAGATGGTTCTACCTTCGTAGTGGCACGTTATTTCCCTGCCGGCAACATTACCAATCAGGGCCACTTCCAGGCCAATGTCCTGCCCCCTAAAAGCTGATCCAAATGTAGCTGGACACAATGAGATCAAAGGGAAGGGAACAGAAAGAGGACAGGGAACAGCTGAAATTGGAGAGACTTTTACCTGGAGGACCAAACAGCGACTGTGCAGCGCAGGATTTGGTTGCCTTAGATATACAGGTCTTACTTGAATAAACAGCTTAACTTTACATTTTTAGGCTTTTATTAACTTGGACACAAAGAGGCATACGTTAAACCTAAAATATTATAGCTAATGCTTGTTATACAATTAACTCGTAAAACTATACTTTCATAGTGGTAAGGTCATTGTGTGCCACATACTTGAGTATGTACATGTCAGCATAACAGTATTAGAAATAATTTTTATGAATGAAATGAACACAGATCTAATCAGTTTTGGTAACATTCATCCCTTTATGATTGGTTATTCTTCAGTATTTGTTTGATTATTGTTCTGTCTTTGTATATTGATATGAATTAAATTTGAAAATTCAAATAGTCTATGAGATGTCATTGTGCATAGTTGCACAATCTGTACAGTTTGCTGAAAGAATTACAACTTTGGGAAGCTAAAAACACTTCTATAATCAATTTCACTGCCACGATTTCTGCTTGCAAGATAAGATAAATGCATATACCCCTGGGGAAAGTTCTAAAAAAAAAAATTCAGGTCAGATTCAAACCATCAGTTTTGAGGACTTAAGCTTTTATTTCTACAATCCTTTGATCTACCATCTGAGCCATTAAGGCAATATTAAAAGTGTGCATGTTCAAAATGTTTGACTATACATTTTTTGTCTTTAAGGTGCATTTATGTGTTTTGTAGATAATGTTGGGAAACAAACAGCTCTGGTTGTAACAGATTTATTTCAGCAGGAGGGTGCAGTATAGCAGCATTACTTGGGAAAGAAAACACGCAAGGGGCGGGGAAGATGTATTTTCCTCTCTTACATGGTCAGCTCCTAAGAACAGACAAAAAAGGTGAAATATCAATATCAATCAAAGGGTTTGTTTGTGTTTGTGAACTATCGCTGTATTTGCAGGGAAAAATGTGTAAACCGTAATCACTGATTTAATAAAAACTTAATAAAGAGA

Function

symbol description
glipr2 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in blood cell and vascular endothelium. Orthologous to human GLIPR2 (GLI pathogenesis related 2).
glipr2l Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human GLIPR2 (GLI pathogenesis related 2).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_06951132_06956691.mRNA False 1028 mRNA 0.47 6 6951132 6956842
TU160307 True 1755 TUCP 0.39 5 6952946 6957767

Neighbor

gene id symbol gene type direction distance location
CI01000027_06947553_06950983 NA coding upstream 149 6946261 ~ 6950983 (+)
CI01000027_06915303_06927001 TMEM67 coding upstream 23824 6915303 ~ 6927308 (+)
CI01000027_06906104_06909909 NA coding upstream 40968 6906104 ~ 6910164 (+)
CI01000027_06859191_06877582 NA coding upstream 73507 6859191 ~ 6877625 (+)
CI01000027_06811768_06817052 NA coding upstream 133969 6811094 ~ 6817163 (+)
CI01000027_07055665_07057014 NA coding downstream 98275 7055117 ~ 7057254 (+)
CI01000027_07142789_07157141 NA coding downstream 185473 7142315 ~ 7157987 (+)
CI01000027_07216718_07225808 NA coding downstream 258926 7215768 ~ 7226571 (+)
CI01000027_07292677_07331000 FAM188A coding downstream 335835 7292677 ~ 7331032 (+)
CI01000027_07375781_07378401 ITGA8 coding downstream 418939 7375781 ~ 7378421 (+)
G141089 NA non-coding upstream 35948 6912496 ~ 6915184 (+)
G141211 NA non-coding upstream 71783 6879005 ~ 6879349 (+)
G141209 NA non-coding upstream 79914 6870981 ~ 6871218 (+)
G141198 NA non-coding upstream 170650 6779685 ~ 6780482 (+)
G141197 NA non-coding upstream 172636 6778215 ~ 6778496 (+)
G141220 NA non-coding downstream 15274 6972116 ~ 6972331 (+)
G141221 NA non-coding downstream 16418 6973260 ~ 6973484 (+)
G141096 NA non-coding downstream 21881 6978723 ~ 6980471 (+)
G141110 NA non-coding downstream 230687 7187529 ~ 7191167 (+)
G141254 NA non-coding downstream 236583 7193425 ~ 7193627 (+)
G141082 NA other upstream 50209 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 240500 6705983 ~ 6708513 (+)
G141052 NA other upstream 679532 6271367 ~ 6271600 (+)
G140924 NA other upstream 985806 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 1192262 5756982 ~ 5758881 (+)
CI01000027_07469157_07471720 NA other downstream 511902 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 993861 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 1069555 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 1301495 8255073 ~ 8264897 (+)
G143033 NA other downstream 2771973 9728815 ~ 9729551 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009983 glipr2l coding NC_007127.7 CM002900.2 27614989 ~ 27622183 (+)