CI01000027_08255251_08264629


Basic Information

Item Value
gene id CI01000027_08255251_08264629
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8255073 ~ 8264897 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000027_08255251_08264629.mRNA
GTTTAAATGAAGTCTCACGGCGAGCAGGCGACAAACGATAGAAAAGTATCACAGTTGGAGATGGTAACAGGGAGATGGGCAGATTTTCAAAAGCATTGAAAAAGAGAAACAAGCAGACGACAAAATCTGAGAGAGATCACTTAAGACAAGACAAAACAGATGAGACGGGAGACTTGACATGAAGAGTGGGAAAAAATCTGCTGGAAACACACATGCATCACAGAGCACCTGTGCAAGGCCCTTTTACTCATGCCCCTGTCTACCTAGATATCCTTTAGAGATCAAGACGCATCCCACAATGCTGGAGAGCCGGGCTGGTGGTGACAGGCTCTGTCGGCCGGCTACGGGGAGCAGATGGCTGGCCAGATGCAGGGTTGCGTTTGACCTTGGGCCCCGTGGAAGGCTAAACATCATAGGCGTCCTCCGGCGCTTCCACCTTTCTGCCGCTCCATGGAGCCACTGCTTTGCTCTGACAGCTTATGCGCTGGCGTTGGGGGGAAAAGGCTTGCACATTCGGAGCCAGGAAGCACCTTCTGGCTCATCTGTGTCCCTTAATCCTGAGAACAGCCATGCTGGTGAGATTGCAGGCCCCTCGGAGTCTCTCCTTCTGGAAATTTCAAAGTCAGGCATTGGCGATTTGGAAGACAGGGAGGCAAAGTCTGCAGGGAGCCTTCATGCAGGTCAGCCCAAATCTTTAGCTGAGAGCCCCTGGTTCAGTGCAGGTGGATCTGAGCTTTTCAGAAAGCATAACTGTGAATACAAGTTACAACCCTCTTGCGGCCCTCAGTATTTCTCTATGCAGCTACGGAGGCAGGGACTCCACAACGGGTGCTGTGAGGATTCACAAACACAAAGGAGTGGCAAATTCATGAAAATGAAACGAATGAGGGTGCTACATCTTAAAAATAGCCAGTGTTCATTTCGATCCTGTGTGTGTGAAATGCGTGGTAAAAGTTTTGACCAGATTCCAAAAAAGTGGTTCCCACAGTCTTCGCGCCGCAGGCAGGACAGACAGCGTGTATCGATCAGGGTGTAAAGCGGGGTTTCGCCAGAGATTAATACTGCGCTCAGCAGAGCTCATGAAGTTGTTAACGTAATGTGGAAAAACCTGTGTGATCAGCCATATTGACAGCGCAGGGCAAGGCCACTGATTAAGTAAGTGAAGTTCATTTCACAAGCTCATTTTGGTTCCCACATCAACACTACATCATGTCTGAATTCTTTCTCCAAAGAAAATTTTGTTTTGCCCTTGTATGAGCCGGTGTTGGGGAGTAAAGAACTAAAAGTTGTGTCAGAGTAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000027_08255251_08264629.mRNA False 1304 mRNA 0.49 5 8255073 8264897

Neighbor

gene id symbol gene type direction distance location
CI01000027_08078236_08079316 LYSMD1 coding upstream 175123 8078236 ~ 8079950 (+)
CI01000027_08064283_08072145 TMOD4 coding upstream 182824 8061684 ~ 8072249 (+)
CI01000027_08052743_08058881 VPS72 coding upstream 195966 8052678 ~ 8059107 (+)
CI01000027_08033124_08037571 NA coding upstream 215839 8032971 ~ 8039234 (+)
CI01000027_08026500_08029412 ENSAB, ENSA coding upstream 225642 8025788 ~ 8032041 (+)
CI01000027_08276000_08284306 NA coding downstream 10902 8275799 ~ 8292755 (+)
CI01000027_08340304_08385380 SEMA6E, SEMA6C coding downstream 75407 8340304 ~ 8385380 (+)
CI01000027_08389687_08404869 NA coding downstream 124625 8389522 ~ 8406117 (+)
CI01000027_08412094_08418277 TMEM79B coding downstream 145266 8410163 ~ 8418633 (+)
CI01000027_08457984_08480177 PEAR1 coding downstream 192216 8457113 ~ 8480827 (+)
G142661 NA non-coding upstream 31678 8223184 ~ 8223395 (+)
G142660 NA non-coding upstream 31925 8222597 ~ 8223148 (+)
G142651 NA non-coding upstream 42653 8212200 ~ 8212420 (+)
G142625 NA non-coding upstream 66932 8186844 ~ 8188141 (+)
G142617 NA non-coding upstream 75792 8179070 ~ 8179281 (+)
G142668 NA non-coding downstream 132629 8397526 ~ 8397784 (+)
CI01000027_08509097_08512799 MC2R non-coding downstream 248599 8509097 ~ 8514407 (+)
G142694 NA non-coding downstream 286294 8551191 ~ 8559581 (+)
CI01000027_07947743_07951397 NA other upstream 303131 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 783359 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 1297306 6951132 ~ 6957767 (+)
G141082 NA other upstream 1354150 6898411 ~ 6900923 (+)
G143033 NA other downstream 1463918 9728815 ~ 9729551 (+)

Expression


Co-expression Network