G142617


Basic Information

Item Value
gene id G142617
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8179070 ~ 8179281 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162057
AATAATTGCAATGCATTTTCACATGATAGGAATGTCTAACTGGTATATGTCAAGATTTTTTTTATTGTATTTCTTTGCTATGCATTTTTGCTGGGGTCAAGATGACCTCAGACAGACACAACAGTAATTGAACAGATATAAAACAGAGAGATAAAGCTTCAGTAATATCTGTCTGCTTTGATTAGGTCAGAGGAACATATTAAAATAATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162057 True 212 lncRNA 0.32 1 8179070 8179281

Neighbor

gene id symbol gene type direction distance location
CI01000027_08078236_08079316 LYSMD1 coding upstream 99120 8078236 ~ 8079950 (+)
CI01000027_08064283_08072145 TMOD4 coding upstream 106821 8061684 ~ 8072249 (+)
CI01000027_08052743_08058881 VPS72 coding upstream 119963 8052678 ~ 8059107 (+)
CI01000027_08033124_08037571 NA coding upstream 139836 8032971 ~ 8039234 (+)
CI01000027_08026500_08029412 ENSAB, ENSA coding upstream 149639 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA coding downstream 75792 8255073 ~ 8264897 (+)
CI01000027_08276000_08284306 NA coding downstream 96518 8275799 ~ 8292755 (+)
CI01000027_08340304_08385380 SEMA6E, SEMA6C coding downstream 161023 8340304 ~ 8385380 (+)
CI01000027_08389687_08404869 NA coding downstream 210241 8389522 ~ 8406117 (+)
CI01000027_08412094_08418277 TMEM79B coding downstream 230882 8410163 ~ 8418633 (+)
G142610 NA non-coding upstream 10501 8168345 ~ 8168569 (+)
G142594 NA non-coding upstream 28491 8149825 ~ 8150579 (+)
G142580 NA non-coding upstream 47406 8131379 ~ 8131664 (+)
G142518 NA non-coding upstream 128490 8046244 ~ 8050580 (+)
G142559 NA non-coding upstream 156811 8021941 ~ 8022259 (+)
G142625 NA non-coding downstream 7563 8186844 ~ 8188141 (+)
G142651 NA non-coding downstream 32919 8212200 ~ 8212420 (+)
G142660 NA non-coding downstream 43316 8222597 ~ 8223148 (+)
G142661 NA non-coding downstream 43903 8223184 ~ 8223395 (+)
CI01000027_07947743_07951397 NA other upstream 227128 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 707356 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 1221303 6951132 ~ 6957767 (+)
G141082 NA other upstream 1278147 6898411 ~ 6900923 (+)
G143033 NA other downstream 1549534 9728815 ~ 9729551 (+)

Expression


Co-expression Network