CI01000028_04445707_04445922


Basic Information

Item Value
gene id CI01000028_04445707_04445922
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 4445666 ~ 4445922 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_04445707_04445922.mRNA
GCATGGGAGTTTAGCAGTCTGTTCTCTCCAGTGGATAAATGGGTCTTTGACGACATGCCCCCTATGGCAGAGCACCTGAAGGTCTGTCCTTTCTACCAGAAGGAGATCCGAAGTGAACCTGTGGCGTTACCCAGCTTGACAGATCTCCAGGAGAGAAGAGGAGAGTTCCAGACTCTAGTCAATAGTGTCCTCACTGTCAAGGCACACAGAGAATAACAGACTGCTGTGTGGCAAAAGCTGTGGACATATAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_04445707_04445922.mRNA True 257 mRNA 0.48 1 4445666 4445922

Neighbor

gene id symbol gene type direction distance location
CI01000028_04171026_04177666 NECTIN1, PVRL1B coding downstream 268000 4170887 ~ 4177666 (-)
CI01000028_04161038_04162439 NA coding downstream 282563 4161030 ~ 4163103 (-)
CI01000028_04128511_04130775 NA coding downstream 314744 4128183 ~ 4130922 (-)
CI01000028_04014641_04074641 NA coding downstream 370853 4014473 ~ 4074813 (-)
CI01000028_03669254_03670964 NA coding downstream 774236 3668964 ~ 3671430 (-)
CI01000028_04448268_04450372 NA coding upstream 2346 4448268 ~ 4450372 (-)
CI01000028_05073226_05082814 NA coding upstream 627057 5072979 ~ 5083555 (-)
CI01000028_05091945_05106575 TRPC6, TRPC6B coding upstream 645909 5091831 ~ 5106575 (-)
CI01000028_05220487_05239955 BAZ1B coding upstream 773689 5219611 ~ 5240699 (-)
CI01000028_05243545_05244982 BCL7BB coding upstream 797575 5243497 ~ 5245074 (-)
G147412 NA non-coding downstream 11548 4433892 ~ 4434118 (-)
G147406 NA non-coding downstream 40149 4404843 ~ 4405517 (-)
G147401 NA non-coding downstream 53750 4391588 ~ 4391916 (-)
G147391 NA non-coding downstream 81072 4364289 ~ 4364594 (-)
G147387 NA non-coding downstream 102415 4342627 ~ 4343251 (-)
G147434 NA non-coding upstream 59163 4505085 ~ 4505289 (-)
G147900 NA non-coding upstream 283515 4729437 ~ 4749525 (-)
G147899 NA non-coding upstream 335476 4781398 ~ 4796891 (-)
G148065 NA non-coding upstream 406078 4852000 ~ 4853497 (-)
G148001 NA non-coding upstream 433999 4879921 ~ 4893107 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 1999353 2441332 ~ 2445596 (-)
G146238 NA other downstream 2285628 2147378 ~ 2160038 (-)
G146190 NA other downstream 2334401 2097570 ~ 2111265 (-)
CI01000028_00474810_00475211 NA other downstream 3970320 473609 ~ 475211 (-)
G144855 NA other downstream 4309790 135392 ~ 137202 (-)
G149329 NA other upstream 2253591 6699513 ~ 6701240 (-)
CI01000028_06969947_06983352 NA other upstream 2524835 6965064 ~ 6984084 (-)
G149474 NA other upstream 2783869 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 3080040 7525962 ~ 7535743 (-)
G149923 NA other upstream 3528646 7974568 ~ 8024244 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00016303 NA coding CM030122.1 CM030122.1 15137408 ~ 15139859 (-)