CI01000028_07189923_07200164


Basic Information

Item Value
gene id CI01000028_07189923_07200164
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 7189276 ~ 7200257 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_07189923_07200164.mRNA
AGATAATACTGCACTAGTATTAGCCATAGTGAAGAAGGCCCATCAGCGCCTCTTCTTCTTGAGACAACTCAAGACCAACTGAGGAAATTCGTAATGGGCTTCAGCATCTTCAGATCGTTCTACACATGCACTGTAAAGACCATCCTGTCCGGCTCTATTACCACCTGGTTTGGAAACAGTACTGCTGCAAACCGCAAAGCTCTGCAGAGGGTAGTACGAACAGCCCACCACATTGTTGCAGGTGCTTATATCAGACTGTGTCAACGTTCGCGTCTCATCGTCTACCTGGGAAAGCACAAAAAGTCTGTTAATGAAACCACAGAGCAGCAGATCAGGGTGGAGAAGATGATTCCTCACCTGAAATATAATGATCAGCCTCATAACAATGATATCATGCTGATCAAGCTGAGAAAGCCTGCCATCTTCAACAAGTATGTAAAGCCAATCCCTCTGACAACCAGCTGCACTTCTGCAGGGGAGCAGTGCTTGGTTTCTGGATGGGGCGACACTGGAGTTGGCTCTGCTTCTGTCCTGCAATGTTTGAATTTGCCTGTACTCTCAAAGACGCAGTGTAAGGGTGCATATGGCACGAATATGACTGAAAACATGTTCTGCGCTGGATTCATGGAGGGAGGCAAAGACTCATGTCAGGGGGATTCTGGTGGCCCTGTAGTGTGCAACGGGAAACTAAAAGGTGTTGTTTCCTGGGGCAAAGGCTGTGCTCAGCCAGACCTTCCTGGGGTTTATGCTGAGGTGTGTCGCTACACTGACTGGATCAAAGACATCATAGCTAATAACTAACTCTTTGATCAGCCTGGTCGGTCCTTTACAAGTTCATTTTCCTAATTATCTGCAATTAAATTCAGTTTGAAGTATGTATGTGTTTCTATCTTGTATTTTTATTTTTAATTCATTATGTTTTTAAGCATTTTTTATTCATGTTTGCTCCCCACCCCTTACACTGTGCTGCTACAGCAGCATGGCAAAATTAAGTACCCCATCATGTGGGTGTGCATGTCACATGGAAAACATTCAAAGCCTCAGAGTATCGACAACAAGGCCATCAGAAGATGTAATTTCTTCCATACAGTAGCTAGTGCACTAAAATTCCCATTACAATGTTAGAATGTTATGGCTTAGCAGACAGCCAATCACATCTGTTGCCTCATATGCACATGGTTTGTACAGAAACACTGTGTATTGACTAGGCTATGTTTCAGCTTCTGAGGGGAAAACTGGAAAACGGAGGGGAAATCTCTGAAGCTAGATAACTCCGGATTTAGTTTACCCATGGTTTAGAATGACTCAAGGATAACTATTGTGTGAAAAGCCCTTTTATTGGAAATGTGTCAATAGAATTATGATGGATTATTTTGGTATTTCTATTTTTTTGTCTAAGGTAGATTTTGCTATAGCTATAGAAAACTGAACTCTCAGTGAACAATAAA

Function

NR:

description
Zgc:171509 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_07189923_07200164.mRNA True 1448 mRNA 0.43 5 7189276 7200257

Neighbor

gene id symbol gene type direction distance location
CI01000028_07148224_07150338 NA coding downstream 38784 7147894 ~ 7150492 (-)
CI01000028_07124749_07145384 NA coding downstream 42167 7122715 ~ 7147109 (-)
CI01000028_07102169_07103695 NA coding downstream 85559 7102127 ~ 7103717 (-)
CI01000028_07010842_07012858 NA coding downstream 176418 7009823 ~ 7012858 (-)
CI01000028_06969947_06983352 NA coding downstream 205192 6965064 ~ 6984084 (-)
CI01000028_07209430_07220674 NA coding upstream 7952 7208209 ~ 7220801 (-)
CI01000028_07236259_07242539 NA coding upstream 35942 7236199 ~ 7242940 (-)
CI01000028_07257403_07298334 NA coding upstream 56920 7257177 ~ 7298334 (-)
CI01000028_07328793_07405548 MYO5A, MYO5AA coding upstream 128065 7328322 ~ 7406679 (-)
CI01000028_07424181_07428224 NA coding upstream 223708 7423965 ~ 7428549 (-)
G149554 NA non-coding downstream 72967 7076989 ~ 7116309 (-)
G149567 NA non-coding downstream 76851 7105656 ~ 7112425 (-)
G149535 NA non-coding downstream 135812 6992080 ~ 7053464 (-)
G149528 NA non-coding downstream 234669 6954397 ~ 6954607 (-)
G149632 NA non-coding upstream 52537 7252794 ~ 7253110 (-)
G149637 NA non-coding upstream 93335 7293592 ~ 7293796 (-)
G149467 NA non-coding upstream 124543 7324800 ~ 7326970 (-)
G149657 NA non-coding upstream 171780 7372037 ~ 7373033 (-)
G149329 NA other downstream 488036 6699513 ~ 6701240 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4742963 2441332 ~ 2445596 (-)
G146238 NA other downstream 5029238 2147378 ~ 2160038 (-)
G146190 NA other downstream 5078011 2097570 ~ 2111265 (-)
G149474 NA other upstream 29534 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 325705 7525962 ~ 7535743 (-)
G149923 NA other upstream 774311 7974568 ~ 8024244 (-)
G150328 NA other upstream 1493141 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 2276588 9469343 ~ 9494746 (-)

Expression


Co-expression Network